Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq736 215 6e-51
seq804 123 3e-23
seq710 95.1 1e-14
>seq736
Length=134049
Score = 215 bits (238), Expect = 6e-51
Identities = 967/1506 (64%), Gaps = 47/1506 (3%)
Strand=Plus/Minus
Query 115864 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGC 115923
|||||||| |||||||| || ||| |||| | | |||||||||| ||||| |||
Sbjct 48025 TTGACAACCTGGAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGC 47966
Query 115924 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 115983
|| ||||| || ||||| |||| || || | || ||| |||||||| || || | |
Sbjct 47965 TCGAAGCATTCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTGGGCATAGGAGCGACG 47906
Query 115984 AGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA- 116042
|| | ||||||||||| ||| | || | || | |||||||||| |||||| || |
Sbjct 47905 AGCAAGCTGTTGCGGACACCGTGCTCCTTGATCTGCTCCTTGAGGGAGTCCCACTCCCAC 47846
Query 116043 --GT-TGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGG 116099
|| ||| | || | |||||||| || ||||||||||||| | || || ||
Sbjct 47845 AGGTCGGAG----GGCTTGACGTCCCACATGTCGTACTGGAGGATACCCTCAGATGCAGG 47790
Query 116100 CGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAG 116159
|||||||| || | ||||| |||||||| |||| || | || | || || ||
Sbjct 47789 CGATCCCTTGAACGATTCATAGGGGCCCTCGACCTTGGCAATCTCCATGGAAGCTTCAAG 47730
Query 116160 GGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC 116219
||| || || || || ||||| || || | |||| | |||||| || ||
Sbjct 47729 GGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAGCCTCGGGAGACTC 47670
Query 116220 AAACGCGAGACGGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTG 116278
||| | |||| ||| | | || | || || ||||| |||||||||| || || |
Sbjct 47669 AAAGGGCAGAC-GCAGAGCGAGGAACGCGTCAGCAAGACCCTGGACACCGACACCGATAG 47611
Query 116279 GGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAA 116338
| || || | ||| || || ||||| ||| ||||| || ||| |||||| |
Sbjct 47610 GTCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTCGACGGGGTAGTGGTTCACATCGATGA 47551
Query 116339 CCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAAC 116398
| || || || | ||| ||||| |||| ||| |||||||| | | | || | |
Sbjct 47550 TGCGGTTGAGGTTGCGGACGACCACCTTGGTGACTTCGTGAAGCTTCTTGAAGTCGTAGC 47491
Query 116399 TGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGG 116458
|| | | | |||| | |||||||| | || |||| || || |||| |
Sbjct 47490 AGCCCTCGTTGTAGTCGACAAAGGCGGGAAGGGCCAGAGAGGCCAAGTTGCAGACAGCGA 47431
Query 116459 TCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGC 116518
||| || || |||||| || || || || || | || || || |||||||
Sbjct 47430 CCTCGTCGGGGGCACAGTACTCAATGATCTCAGTGCAGAGGTTAGAGCTGCGGATGGTGC 47371
Query 116519 CCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCC 116578
|||||||||| || || ||| ||| || |||||||| ||||| | || | |
Sbjct 47370 CCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAAGGGGTTAC 47311
Query 116579 CCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTG-GCACAG-TGGC 116636
| ||||| || |||| || || || | | ||| | || ||| |||| | |||
Sbjct 47310 CAGTCTCGGTCTGGGCCTCCAGGATGGAGTACCA-----CAGCTTCTGAGCACGGATGGT 47256
Query 116637 GTT---GGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCAC 116693
|| | || |||||| |||||||||| ||| || ||||||||||| || ||
Sbjct 47255 CTTACGACCACGTCCCTCCCTCTCGTACTTTTCGTACAGAGCCTCAAACTCCTC-GCCGT 47197
Query 116694 AGC-CTCTGAGAGCCCTGGTGCCTT-ATCTGGACAGAAGAGAGACCATTGACCA--CCCT 116749
||| || | || || || || || | || || | ||| | ||| | ||| ||
Sbjct 47196 AGCAGTCAGCAAGACCAGG-GCATTCGTTGGGGCACATGAGCGTCCA--GTCCAAGTTCT 47140
Query 116750 CCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGC 116809
||| || |||||||||||||| || |||||||| || || ||| | || || ||
Sbjct 47139 TCTCGACACGCTTCATGAAGAGATCGGGGATCCACAGAGCAAGGAACAAGTCGCGGGCGC 47080
Query 116810 GAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 116869
|| | || || | || || || || | || | ||||| | || || |||||||
Sbjct 47079 GAACCTCCTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCC 47020
Query 116870 ACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCGACGACCAGCCTGGTTTACAT 116923
| || || ||||| | || | | || | |||| ||| |||||| || |
Sbjct 47019 AGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTG---TTGCCACCCTGGTCGACGT 46963
Query 116924 ACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTG 116983
| | || || ||| || || || ||||| || || || || | || ||| || |
Sbjct 46962 ATCGGGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGG 46903
Query 116984 T-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCC 117041
| || ||| || ||| | |||| | || ||||| || || ||| || || ||
Sbjct 46902 TGCCGGCGATGTAGGAGCC--AGTGGCACGGATGCGGTGGACGTTCAGACCGATGCCACC 46845
Query 117042 TGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTC 117101
||| ||| || || || ||| | | || || | ||||| || || || |||
Sbjct 46844 AGCCATCTTGGAAATCATGGCACACGTCTTCAGGGTGTCATAGATACCCTCAATGCTGTC 46785
Query 117102 ACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGA 117160
|||| | | | |||||||| |||| || ||| | || || ||||| ||||
Sbjct 46784 GTCCTTCATGTCCACCAGGAAGCATGAGGACAGCTG-GGCTTGCGGGGTGCCAGCATTGA 46726
Query 117161 AGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAA 117218
||||||| || | |||||| ||| | | |||| |||||| | ||| ||||| |
Sbjct 46725 AGAGGGTAGGGGAGGCGTGGGTGA--AGAACTTGCTGGACATGAGGTGGTATGTCTCGAG 46668
Query 117219 GACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGG 117278
|||| |||||| || || || || | | || ||||||| ||||| ||| ||
Sbjct 46667 GACACGCTCAATGTCGTCTCCCCAGATGCCAACGGCCACTCGCATAATCATGTGTTGTGG 46608
Query 117279 TGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACC 117338
|| | | | || |||||| || | ||||| ||||| ||||||| ||
Sbjct 46607 CCGCTCGACAATCTTGCCGTCGAGCTTCAGAAGGTATGATCGCTCCAGCGTCTTGAAGCC 46548
Query 117339 AAAATA 117344
||| ||
Sbjct 46547 AAAGTA 46542
>seq804
Length=175399
Score = 123 bits (136), Expect = 3e-23
Identities = 345/521 (66%), Gaps = 9/521 (2%)
Strand=Plus/Plus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| |||||||||||||| |||||||| || || || ||| ||| ||
Sbjct 35148 GCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCG 35207
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||||||||| |||||||| | ||||||||| | ||| | || |||||||||
Sbjct 35208 GGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATA 35267
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAA 127698
||||| ||| || || |||| ||||||| ||||||||| || | |||| | |
Sbjct 35268 CCCTCGACAGCGGCAAAGGCAACGAGACGCTGGGCAAAGGA-CGAGTTCTTGTCCTGGAT 35326
Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758
||| |||||||| | ||||| || || || || | ||||| || || | ||
Sbjct 35327 CCATCGAATCGCCCAGTCAGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAA 35386
Query 127759 GAGTTCCTTCTTTTCTGATG-GATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 127817
||| | || | | || | || ||||| || | || ||||| || || || |
Sbjct 35387 GAGGTAGTTGCGCT-GGCTGTGCTCCTTGATATAAGTGTCGATGAGCAGGGAGTACGTCT 35445
Query 127818 CGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 127876
|| ||||| | | ||| || | ||| | |||| || |||| || ||| |||
Sbjct 35446 CGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAAAAGCAGCGAGCCTCGGGGATC 35504
Query 127877 TGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 127936
|| ||||| || || | | ||||| ||||| || || || | ||
Sbjct 35505 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCGGCG 35564
Query 127937 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 127993
|| || |||||||| | ||||| | || || | ||||||| || | ||||||
Sbjct 35565 AAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAG 35624
Query 127994 TCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
|||| || ||||| || || || | |||||| || |||||
Sbjct 35625 TCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCA 35665
>seq710
Length=40501
Score = 95.1 bits (104), Expect = 1e-14
Identities = 185/268 (69%), Gaps = 8/268 (3%)
Strand=Plus/Plus
Query 12875 ACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTC 12934
||||| |||||| |||||||||||||| | ||| || || ||| | ||| | | |
Sbjct 23830 ACCGATGGCGTCGATTTCGTCAATGAAGATGATGCAGGGCGCATTCTTTCGGCCTTCCGC 23889
Query 12935 AAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGC 12994
|| | |||||||| | | || || || ||||||||||||||||| | | |
Sbjct 23890 GAACAAGTCTCGCACACGAGAAGGGCCCACGCCAACAAACATCTCCACAAACTCAGAACC 23949
Query 12995 G-GAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 13053
| || | || |||||| ||| || || || || |||| |||||| || ||||
Sbjct 23950 GCTCACGCT-GAAGAAGGGCACGCCAGACTCTCCGGCAGTGGCCTTGGCGAGAAGCGTCT 24008
Query 13054 TCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC--ACTTC- 13110
| || || ||||| || ||||||| |||||| || |||||| ||||||| ||||
Sbjct 24009 TTCCTGTTCCTGGAGGGCCGGCGAGAATGGCACCGCGAGGGATCTTGGCACCCAGCTTCT 24068
Query 13111 CAAAGTAGCGCTCGGGTTGTTTAAGAAA 13138
|||| | ||||||||| || || ||
Sbjct 24069 CAAACT---TCTCGGGTTGCTTCAGGAA 24093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613500413076600
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