Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq804 230 4e-55
seq736 145 1e-29
>seq804
Length=175399
Score = 230 bits (254), Expect = 4e-55
Identities = 565/841 (67%), Gaps = 23/841 (3%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
|||||| || |||||||||||||| ||| ||| || ||||| || | || |||||
Sbjct 34874 CTTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAAATGTTCTCCATAAAGTCAAAGGGGTT 34933
Query 159709 CTTC-ACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767
| || || || |||| |||||||| |||||| | ||| || ||||| |
Sbjct 34934 GGACGACTTG-TACACCTTCTCGTTGCCGAGAGCTACCAGCAGGCGGTCGGCGACAAACT 34992
Query 159768 CGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAG--CCTAACGGGGAGCGCTT 159824
| ||||| || | ||| | | |||| || |||||||| | || || || ||||
Sbjct 34993 CAATGTA-CTGCTTCATGAGGTTGGAGTTCATGCCCAGCAGGGCGCAA--GGCAGAGCTT 35049
Query 159825 CCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTG-CGAGACACGTTCG 159883
| | || |||||||| ||| || ||| || ||||| | || | ||| ||| | |
Sbjct 35050 CGGTCAAAAACTCCTGCTCGATGCGGACGGCGTCGGTGATGATGTCACGAATCACCTCCT 35109
Query 159884 TAC---CCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGC 159940
| | | ||| | | | ||| | ||| ||||| |||||||| ||||
Sbjct 35110 TGCTGGCGCGGTTCTTC----AGGTGAGAGTG---CAGCAGGCAGGCAAAGTCCGTGTGC 35162
Query 159941 AGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGC 160000
|| |||||||| |||||||||| ||||||||| | | | ||||| ||||||| || |||
Sbjct 35163 AGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACCTCGC 35222
Query 160001 GGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCA 160060
|||||||| ||||||| ||||| |||||||| || ||||| ||||| || || |||
Sbjct 35223 TTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACAGCGGCA 35282
Query 160061 AACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCAT 160120
|| || ||||| | || |||| || | ||| |||| ||| |||| | | |||||
Sbjct 35283 AAGGCAACGAGACGCTGGGCAAAGGACGAGTTCTTGTCCTGGATCCATCGAATCGCCCAG 35342
Query 160121 TCAGCCTTCTTTGCG-ATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTC 160179
||||||||| ||||| ||||| || ||| ||| | |||||| || | || |||
Sbjct 35343 TCAGCCTTC-TTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAGTTGCGCTG 35401
Query 160180 CTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTC 160239
| |||||||| ||| | || ||| |||||| | || | ||| | || ||
Sbjct 35402 GCTGTGCTCCTTGATATAAGTGTCGATGAGCAGGGAGTACGTCTCGGAGTGGATGTTCTC 35461
Query 160240 GATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAA 160299
|| ||||| ||| ||| || | ||||| | ||| ||||| ||||
Sbjct 35462 CATCATGATCTGGAAGCCGTAAAAGCAGCGAGCCTCGGGGATCTGGACCTCGCCGCTGAA 35521
Query 160300 CCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTG 160359
| | |||| || | || || | ||||| | ||| || ||||| |||| | |||
Sbjct 35522 GCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCGGCGAAGAAGGCCAGGATGTG 35581
Query 160360 AGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGG 160418
||||||||| | ||||||| | ||| || | || | ||||| ||| || ||| | ||
Sbjct 35582 AGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTCGTG-CAGGTCCTTGG 35640
Query 160419 CCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGA 160478
|| |||| ||| || ||| |||| || ||||| || |||||||||| |||||
Sbjct 35641 ACAGGTCAATCTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTTGCCAGA 35700
Query 160479 T 160479
|
Sbjct 35701 T 35701
>seq736
Length=134049
Score = 145 bits (160), Expect = 1e-29
Identities = 386/576 (67%), Gaps = 14/576 (2%)
Strand=Plus/Minus
Query 203843 TCCACCGTGAACTGAAT-GGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACATGCCG 203899
|| || |||||||| || |||| || | || |||||| | | || ||||||||||||
Sbjct 48370 TCGACGGTGAACTGGATAGGCG--CAGCTGC-GGCCTGGGTACGGAGGTAGTACATGCCG 48314
Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959
||||| || || || ||| ||| | ||||||| | | |||| || |||||
Sbjct 48313 GTCTTGAGACCGAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATCGTGGGG 48254
Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019
|| |||||| ||||| || |||||| ||||||||||||| | ||||| || |||
Sbjct 48253 TCCTTCATGTGGATGTTTAGGGACTGGGACTGGTCGATGAAAGCACCACGATCAGCCGCC 48194
Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGT 204079
|| | || || ||| || |||||||| || |||||| ||| | | || |||
Sbjct 48193 ATCTGGACGATTTGACGCTGAGATATCTCCCAGACGGTCTTGTACAGGGCCTTGATGTCC 48134
Query 204080 TGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGT 204138
| || | | | | || ||| || |||||||| ||||| || | | || || |
Sbjct 48133 TCGGGGATGT-TGGGAATGTTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTCTTCAT 48075
Query 204139 CTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTG 204198
| || ||||| ||| || ||| ||| | || ||||||| | |||
Sbjct 48074 GGCGTCAGACCACAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAAGGGTTGACAACCTG 48015
Query 204199 AAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTC 204258
|| || || | || || | ||| | | | |||| |||| | || ||||| ||
Sbjct 48014 GAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCATTC 47955
Query 204259 GTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTT 204318
||||||||| | |||||||| ||| ||||| |||||||| ||||| | ||||| | |||
Sbjct 47954 GTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTGGGCATAGGAGCGACGAGCAAGCTGTT 47895
Query 204319 GCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGTCCAGTCGTGCA--TCGCACT 204375
||| ||||||| | | || |||| ||| || ||| ||| || || ||| |
Sbjct 47894 GCGGACACCGTGCTCCTTGA-TCTGCTCCTTGAGGGAGTCCCACTCCCACAGGTCGGA-- 47838
Query 204376 GGGTTTCACGCCCCACATGTCGAACTGAAAGATGCC 204411
||| || ||| ||||||||||| |||| | ||| ||
Sbjct 47837 GGGCTTGACGTCCCACATGTCGTACTGGAGGATACC 47802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795146403595600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |