Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq373 138 1e-27
seq877 134 2e-26
seq764 125 8e-24
>seq373
Length=44988
Score = 138 bits (152), Expect = 1e-27
Identities = 158/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| |||| || |||||||| ||||| ||||||||| | || || |||| ||
Sbjct 36809 ACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTTCC 36750
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || ||||||||||||||||| | ||| | | ||||||||||
Sbjct 36749 AGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGA 36690
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||||| ||| | | | || || |||||||| |||| || || || ||
Sbjct 36689 ATCTTCGACTTGA-CGTTGTCGATGGTATCAGATGATTCCACTTCCAGAGTAATCGTCTT 36631
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||||| || ||||||||||| |||||
Sbjct 36630 ACCCGTCAGTGTCTTAACAAAGATCTGCAT 36601
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| || | ||| |||||| ||||| ||||||||||| || || || |||| ||
Sbjct 36067 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCA 36008
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| || || || | ||||||||||| | || | | |||||||||| |
Sbjct 36007 AGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGG 35948
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| ||| | | | | |||||| ||| || || || | |||||||| |||
Sbjct 35947 ATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTG 35888
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || || ||||| |||||
Sbjct 35887 CCGGTGAGGGTCTTGACGAAGATCTGCAT 35859
Score = 111 bits (122), Expect = 2e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||| |||| || |||||||| ||||| ||||||||| | |||||| |||| ||
Sbjct 36581 ACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCGTCTTCC 36522
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || ||||| |||| |||||||||||| | || | | ||||||||||
Sbjct 36521 AGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGA 36462
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| ||||| ||| | | | || || || || || |||| |||||||| ||
Sbjct 36461 ATCTTGGACTTGA-CGTTGTCAATAGTATCAGATGACTCGACCTCCAGGGTGATGGTCTT 36403
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || || || || |||||
Sbjct 36402 TCCTGTGAGGGTCTTGACGAAAATCTGCAT 36373
Score = 102 bits (112), Expect = 9e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| || || | |||| |||||| ||||| ||||||||||| || || || |||| ||
Sbjct 36353 ACAAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCA 36294
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| || || || | ||||||||||| | || | | |||||||||| |
Sbjct 36293 AGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGG 36234
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| ||||| ||| | | | ||||| || || || || | ||||| || ||
Sbjct 36233 ATCTTGGACTTGA-CGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATCGTCTT 36175
Query 46564 GCCCGTCAGCGTTTTAAC 46581
||| ||||| || || ||
Sbjct 36174 GCCGGTCAGGGTCTTGAC 36157
>seq877
Length=50207
Score = 134 bits (148), Expect = 2e-26
Identities = 164/221 (74%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| ||||| || | || |||||||| ||||| ||||||||| || ||||| |
Sbjct 31688 CGCAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 31629
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| ||||||||||||||||| || |||| |||||||||||| | || | || |||||||
Sbjct 31628 TCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTG 31569
Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| ||||| ||||| ||| | | | |||||| || ||||| || | |||||
Sbjct 31568 TCCTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 31510
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598
|| || ||||| || || || || || || ||||| ||||
Sbjct 31509 CGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGC 31469
>seq764
Length=87966
Score = 125 bits (138), Expect = 8e-24
Identities = 137/182 (75%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||||| || || || | || ||||||||||| || ||||| |
Sbjct 48336 CCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 48395
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
|||| ||||||||||| | || | || |||||||||| |||||| ||||| |
Sbjct 48396 TCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 48455
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | ||||||| || || || || | |||||||| ||||||||||| || || || |
Sbjct 48456 CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 48515
Query 46584 AG 46585
||
Sbjct 48516 AG 48517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565232147050200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |