Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq804 343 1e-89
seq373 127 2e-24
seq877 116 4e-21
seq764 102 8e-17
>seq804
Length=175399
Score = 343 bits (380), Expect = 1e-89
Identities = 579/826 (70%), Gaps = 19/826 (2%)
Strand=Plus/Plus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
|||||||| || || || || || ||| ||||||| | |||||| || |||||||||
Sbjct 34875 TTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAAATGTTCTCCATAAAGTCAAAGGGGTTG 34934
Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741
| | ||||| ||| | |||||| || | || ||||| | |||||| || |||
Sbjct 34935 GACGACTTGTACACCTTCTCGTTGCCGAG-AGCT--ACCAGCAGGCGGTCGGCGACAAAC 34991
Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTTC 132800
|| ||||| ||| |||| | | | || | |||||||| |||| ||||| |||||
Sbjct 34992 TCAATGTACTGCTTCATGAGGTTGGAGTTCATGCCCAGCAGGGCGCAA-GGCAGAGCTTC 35050
Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860
||| | ||| ||||||||| ||| |||||||||| ||| || | || | ||
Sbjct 35051 GGTCAAAAACTCCTGCTCGATGCGGACGGCGTCGGTGATGATGTCACGAATCACCTCCTT 35110
Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920
||| | || | | || || | || || ||| |||||||| |||| |||||
Sbjct 35111 GCTGGCGCGGTTCTTCAGGTGAGAGTGCAGCAGGCAGGCAAAGTCCGTGTGCAGACCCTC 35170
Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980
||| | || ||||| |||||| || |||| |||||||||||| || || || |||||
Sbjct 35171 GTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACCTCGCTTCTTGAG 35230
Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040
||| || |||| ||| || || ||||||| |||||||| || || || || ||
Sbjct 35231 CCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACAGCGGCAAAGGCAAC 35290
Query 133041 CAGGCGCTCGCCGAACGTGGC-TTCTT-TGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098
|| |||| | | || | | ||||| | |||| ||||| || | |||||| || |||
Sbjct 35291 GAGACGCTGGGCAAAGGACGAGTTCTTGTCCTGG--ATCCATCGAATCGCCCAGTCAGCC 35348
Query 133099 TTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAG 133158
|| | | ||| || || || || |||||||| || | | |||| | || |
Sbjct 35349 TTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAG--GTAGTTGCGCTGGCTGT 35406
Query 133159 GAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216
| | | || ||||||||||| || ||| | || ||||| | |||||||||
Sbjct 35407 GCTCCTTGATATAAGTGTCGATGAGCAGGGAGTACGTCTCGGAGTGGATGTTCTCCATCA 35466
Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCT 133276
||| || |||||||||||||| || |||||| | ||| || || ||| ||||
Sbjct 35467 TGATCTGGAAGCCGTAAAAGCAGCGAGCCTCGGGGATCTGGACCTCGCCGCTGAAGCGCT 35526
Query 133277 CGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGA 133336
||||||| || |||||||| |||||||| ||||||||| |||||||| | ||| ||
Sbjct 35527 CGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCGGCGAAGAAGGCCAGGATGTGAGAGA 35586
Query 133337 TGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGT 133393
|||| | ||||| ||||||| ||| | ||||||| || ||||||||||||||
Sbjct 35587 TGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTCGTGCAGGTCCTTGGACAGGT 35646
Query 133394 CCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| | ||||||| ||||||| || || |||||||| |||||||||||
Sbjct 35647 CAATCTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACAT 35692
>seq373
Length=44988
Score = 127 bits (140), Expect = 2e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| |||| |||||| | ||
Sbjct 35859 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCC 35918
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| ||||| || || | |||||
Sbjct 35919 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAG 35978
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | || ||||| ||||| || |||| || |||||| ||||||||||
Sbjct 35979 CAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGCCGAACCCTCTCCGACTACAAC 36038
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| | || || || |||| || ||
Sbjct 36039 ATCCAGAAGGAGTCTACCCTCCACCTGGTTCTCCG 36073
Score = 118 bits (130), Expect = 1e-21
Identities = 160/218 (73%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || ||||||||| | || |||||| | |
Sbjct 36373 ATGCAGATTTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTGGAGGTCGAGTCATCT 36432
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | |||| | || || || | ||||| ||||| ||||| | |||||
Sbjct 36433 GATACTATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCA 36491
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || |||| ||| || || |||||||| |||| ||||| | | |||||||||
Sbjct 36492 GCAGCGCCTGATTTTCGCTGGTAAGCAGCTGGAAGACGGCCGCACTTTGAGCGACTACAA 36551
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| ||| || ||||| ||||| || |||
Sbjct 36552 CATCCAGAAGGAGAGC-ACCCTGCACTTGGTCCTCCGT 36588
Score = 100 bits (110), Expect = 3e-16
Identities = 133/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313
|||| || || || || ||||| || ||||| |||| || ||| || | |||| | |
Sbjct 36155 TCGTCAAGACCCTGACCGGCAAGACGATCACTCTCGAGGTTGAGTCCTCTGACACCATCG 36214
Query 38314 A-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| |||| | || || |||| ||||| ||||| || || | ||||| ||||| |||
Sbjct 36215 ACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGTCTC 36273
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | || ||||| ||||| || |||| || |||||| ||||||||||||||| |||
Sbjct 36274 ATCTTTGCTGGCAAGCAGCTTGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAG 36333
Query 38433 GA 38434
||
Sbjct 36334 GA 36335
Score = 82.4 bits (90), Expect = 8e-11
Identities = 104/138 (75%), Gaps = 4/138 (3%)
Strand=Plus/Plus
Query 38337 GACAAAGAGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGA 38395
||||| ||||| || |||||| ||||| ||||| | || | || || || ||||||||
Sbjct 36694 GACAAGGAGGGTAT-CCCGCCTGACCAGCAGCGCTTGATCTTTGCTGGTAAGCAGCTGGA 36752
Query 38396 CGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGC 38454
|||| || ||| | | ||||||||||||||| ||||| ||| || ||||| |||| |
Sbjct 36753 AGACGGTCGTACCTTGAGCGACTACAACATCCAGAAGGAGAGC-ACTCTGCACCTGGTTC 36811
Query 38455 TGCGTTTGAGAGGCGGCC 38472
| ||| | | || ||||
Sbjct 36812 TCCGTCTCCGTGGTGGCC 36829
>seq877
Length=50207
Score = 116 bits (128), Expect = 4e-21
Identities = 161/220 (73%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || |||||||| || || |||||| | || || ||| |
Sbjct 31471 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 31530
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | |||| | || || || | ||||| ||||| || ||| | ||
Sbjct 31531 TCCGACACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGA 31589
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| || || | || ||||| ||||| || || | |||||||| | ||||||
Sbjct 31590 CCAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 31649
Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
||||||||| ||||| ||| || || || |||| |||||
Sbjct 31650 CAACATCCAGAAGGAGAGC-ACCCTCCACCTGGTCCTGCG 31688
>seq764
Length=87966
Score = 102 bits (112), Expect = 8e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| ||||||||| | || |||||| || |||||| |
Sbjct 48516 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACGATC 48457
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| ||||| |||||| | ||||| ||||| |
Sbjct 48456 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGATTG 48397
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| || || ||||| || || | || ||||| ||||||||||||||| |||
Sbjct 48396 ATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACATCCAGAAG 48337
Query 38433 G 38433
|
Sbjct 48336 G 48336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500167266838400
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