Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq474 241 2e-58
seq744 127 3e-24
>seq474
Length=61714
Score = 241 bits (266), Expect = 2e-58
Identities = 468/689 (68%), Gaps = 8/689 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || || || | ||||| || ||||||||
Sbjct 41928 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCC 41869
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | | || ||||| || ||||||||||| || || || ||||| |||
Sbjct 41868 TCCTCAATGGTCAGGAGGGACACATCGAAGGTACCACCACCGAGATCGAAGATGAGCACG 41809
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || ||||| || || ||||| ||||| || || || || || ||
Sbjct 41808 TTGCGCTCGCCCTCGACCTTCTTGTCAAGGCCGTAGGCGATGGCAGCGGCGGTGGGCTCG 41749
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||| || ||| ||||| ||||| | || || || || || || ||
Sbjct 41748 TTGATGATACGCAGGACGTTGAGGCCGGCAATGAGACCGGCGTCCTTGGTAGCCTGACGC 41689
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| ||||| |||||||| ||||| || | ||| |||| |||| | |||| ||
Sbjct 41688 TGGCTGTCGTTGAAGTAGGCGGGGACGGTGATGACGGCGTTGTTGACGGTGGTACCAAGG 41629
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| | || ||| | || ||| ||||| || ||||| || || ||||| || | |
Sbjct 41628 TAGGCCTCGGCGGTCTCACGCATCTTGGTCAGGACCATGGAGGAGATCTCCTCGGGGGTG 41569
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC-CGGG 7875
|| ||| | || || || || ||||| || || | ||| || | || | |
Sbjct 41568 AAGGTCTTCTTCTCGCCCTTGAACTCAACCTCGATGACGGGCTT----GGAGTTCTTGTC 41513
Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935
||| ||||| | | | | ||||| ||| | ||||||| |||| | ||||| |
Sbjct 41512 GATGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGGGTCGGCGAACTTGCG 41453
Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995
|| || | ||||| || || || || ||||| | |||||||||||| ||||||||
Sbjct 41452 GCCAATCAACCGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTT 41393
Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055
|| ||||| || || ||||| || | || || || || ||| |||| || |||||
Sbjct 41392 GGCGGCGTCACCAATCAGACGCTC---GGTGTCGGTGAAGGCAACGAACGAGGGCGTCGT 41336
Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115
||| || || |||||||| || || || || ||||| | | ||| ||||||||
Sbjct 41335 TCGGTTACCCTGGTCGTTGGCGATGATATCACATCGGTCCTCACGGAAGATACCGACGCA 41276
Query 8116 CGAATACGTTGTTCCTAAATCAATACCGA 8144
|| || || || || | || |||||||
Sbjct 41275 TGAGTAGGTAGTACCCAGGTCGATACCGA 41247
>seq744
Length=46994
Score = 127 bits (140), Expect = 3e-24
Identities = 359/545 (66%), Gaps = 15/545 (3%)
Strand=Plus/Minus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| ||||| ||||| |||||||| |||| | ||| || | || ||| | | ||
Sbjct 5195 AGCTCCTCGAAACGAGCACGGGTGATGGTCATGGTGAAGTCCTCACCCTCGAAAAGAGAG 5136
Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361
|| || |||||||| | || || || | ||| || ||||| || ||||| || |
Sbjct 5135 TCGATCTCAATGGTGGCCTGGGCACCGCTGGAGAGG--GTACGCTTGGCACGCTCGCAAG 5078
Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGT---TACCGGAAATATCTTTCTTATGTTTAC 7418
| || || | | || || ||||| |||| | | || || ||||| || |
Sbjct 5077 CAGTGCGGAGTCTTCGCAGAGCACGGGGGTCGTTGCTGGGG---TCCTTCTTGGTCTTGC 5021
Query 7419 GTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAG 7477
| | ||||| | | |||| |||| | || | | ||||| || | |||||||||
Sbjct 5020 GAGTGAACTCCTTCTTGCAGTGGTCGA-GCAGGTTGGTGTCGAAGTCCTGGCCACCCAAG 4962
Query 7478 TGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAA 7537
|| || || || ||||| || ||||| |||| ||| || | ||||| | | ||
Sbjct 4961 TGGGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCACCCTGGATGTTCAGGAGGGAG 4902
Query 7538 ACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTC 7597
||||| || |||||||||||||| || | || || ||||| || | ||| | ||
Sbjct 4901 ACATCGAAGGTACCACCACCCAGATCGTAGATCAGGACGTTGCGCTCCTTGTCAGTCTTG 4842
Query 7598 TTATCG---AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654
| | |||||||| ||||| || || || || || || || || ||||| || |
Sbjct 4841 CCAGCACCCAGACCGTAGGCGATGGCAGCAGCGGTAGGCTCGTTGATGATACGGAGGACG 4782
Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714
|| ||||||||||| | | ||||| || || || || || || ||||| ||||||
Sbjct 4781 TTGAGGCCAGCAATGGCACCAGCATCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAG 4722
Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774
|| ||||| || | ||| || | | || ||||| || || | | || || || ||
Sbjct 4721 GCAGGGACGGTGATGACAGCCTTCTCAACCTTCTTGCCAAGCTTGGTCTCGGCAATCTCC 4662
Query 7775 TTCAT 7779
|||||
Sbjct 4661 TTCAT 4657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635125773843400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |