Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq736 224 1e-53
seq804 143 3e-29
seq710 100 4e-16
>seq736
Length=134049
Score = 224 bits (248), Expect = 1e-53
Identities = 925/1437 (64%), Gaps = 39/1437 (3%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
||||| ||||| | ||||| || || | || ||| || || || ||||| |||
Sbjct 46608 CCACAACACATGATTATGCGAGTGGCCGTTGGCATCTGGGGAGACGACATTGAGCGTGTC 46667
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731
| ||||||||| || |||||| | | |||| |||||| | || |||||||||
Sbjct 46668 CTCGAGACATACCACCTCATGTCCAGCAAGTTCTTCACCCACGCCTCCCCTACCCTCTTC 46727
Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791
|| ||||| || || | |||| ||||| || ||||| | | | ||||| ||
Sbjct 46728 AATGCTGGCACCCCGCAAGCCCAGCTGTCCTCATGCTTCCTGGTGGACATGAAGGACGAC 46787
Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851
|| | || || || | ||| || | |||||| || || ||| |||||||
Sbjct 46788 AGCATTGAGGGTATCTATGACACCCTGAAGACGTGTGCCATGATTTCCAAGATGGCTGGT 46847
Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACAA 111909
|| ||||| || || |||| || | |||| | ||| || | | || || |
Sbjct 46848 GGCATCGGTCTGAACGTCCACCGCATCCGTGCCACT--GGCTCCTACATCGCCGGCACCA 46905
Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969
| || || | || ||||| || ||||| || || || ||| ||| || || || |
Sbjct 46906 ACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAACACTGCCCGATACG 46965
Query 111970 TAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023
| |||| | ||| ||||| || | | || |||| || ||||| ||||
Sbjct 46966 TCGACCAGGGTGGCAACAAGCGTCCT---GGTGCCTTTGCCATCTACCTCGAGCCCTGGC 47022
Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083
|||| || || | || |||||||| | || ||||| || | ||||||| ||
Sbjct 47023 ACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAGAACCACGGCAAGGAGGAGGTTCGCG 47082
Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143
|||||| | ||| ||||| ||||| || ||||||||||||||| | || ||| |||
Sbjct 47083 CCCGCGACTTGTTCCTTGCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGA 47142
Query 112144 G--TGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGG 112200
||| | ||| | ||| | || || || || || || ||||| | || | |
Sbjct 47143 ACTTGG--ACTGGACGCTCATGTGCCCCAACGAATGC-CCTGGTCTTGCTGACTGCTACG 47199
Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG---GAAGAAAGTCGGGCGACTGCGA 112257
| ||||||||||| || || ||| |||||||||| || | | || || || | ||
Sbjct 47200 GCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGGGAGGGACGT-GGTCG--TAAGA 47256
Query 112258 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316
| | | ||| | || | ||||| | | || || || | || |||||||||||||
Sbjct 47257 CCATCCGTGCT-CAGAAGCTGTGGTACTCCATCCTGGAGGCCCAGACCGAGACTGGTAAC 47315
Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376
|| | ||||||||||| ||| ||| |||| ||||| || || ||||| |||||
Sbjct 47316 CCCTTCATGCTTTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACTTGGGCACC 47375
Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436
||| || || |||||||| || || ||| | || | | | || ||| |||
Sbjct 47376 ATCCGCAGCTCTAACCTCTGCACTGAGATCATTGAGTACTGTGCCCCCGACGAGGTCGCT 47435
Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--AT 112494
|| || ||| | || || | || || ||| | ||| || | | | || | | | |
Sbjct 47436 GTCTGCAACTTGGCCTCTCTGGCCCTTCCCGCCTTTGTCGA-CTACA-ACGAGGGCTGCT 47493
Query 112495 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTA 112554
|| | | || || |||||||| || || ||| ||||| ||| | | |
Sbjct 47494 ACGACTTCAAGAAGCTTCACGAAGTCACCAAGGTGGTCGTCCGCAACCTCAACCGCATCA 47553
Query 112555 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 112614
| ||| || |||||||| ||| ||||| || || ||| | ||||| || |
Sbjct 47554 TCGATGTGAACCACTACCCCGTCGAGGAGGCTCGCAACAGCAACATGCGCCACCGACCTA 47613
Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGAT 112673
| ||| |||||||||| ||||| || || | ||| | || || || | | |||||
Sbjct 47614 TCGGTGTCGGTGTCCAGGGTCTTGCTGACGCGTTCCTCGCTCTG-CGTCTGCCCTTTGAG 47672
Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT 112733
|| ||| || || | || || || || ||||| || || || ||||| |||
Sbjct 47673 TCTCCCGAGGCTCGCGAGCTGAACAAGCAGATCTTCGAGACCATTTACCATGCCGCCCTT 47732
Query 112734 GAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790
|| || ||| |||| | || |||| || || || |||||| | || |||| ||
Sbjct 47733 GAAGC---TTCCATGGAGATTGCCAAGGTCGAGGGCCCCTATGAATCGTTCAAGGGATCG 47789
Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 112850
|| || || | || | || || | || |||||||| | || || | |
Sbjct 47790 CCTGCATCTGAGGGTATCCTCCAGTACGACATGTGGGACGTCAAGCCCTCCGACCTGTGG 47849
Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910
|| |||||| | |||||||| | ||||||||| | ||| | || ||||| | | |
Sbjct 47850 GAGTGGGACTCCCTCAAGGAGCAGATCAAGGAGCACGGTGTCCGCAACAGCTTGCTCGTC 47909
Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970
|| || ||||| || ||| ||| | || || |||| || || |||||||| || |||
Sbjct 47910 GCTCCTATGCCCACTGCCAGTACCTCTCAGATTCTGGGCAACAACGAATGCTTCGAGCCC 47969
Query 112971 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027
||||| | |||||||| | | || | ||| || || ||||| | ||||||||
Sbjct 47970 TACACCTCCAACATCTACCAGCGACGTGTCCTTGCTGGTGAGTTCCAGGTTGTCAAC 48026
>seq804
Length=175399
Score = 143 bits (158), Expect = 3e-29
Identities = 179/243 (74%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149
||||| | ||||| | || |||| || |||| ||||| || || ||||| ||
Sbjct 35389 CTCTTCAACGCCATTGAGACCATTCCTTGCATTCGCAAGAAGGCTGACTGGGCGATTCGA 35330
Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208
||| | | |||| | ||| ||||||| |||| ||| | || ||||| ||| ||
Sbjct 35329 TGGATCCAGGACAAGAACTCGT-CCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCTGTCGA 35271
Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268
||||||||||||| ||| |||| | | |||| |||||||||||||||||||||||
Sbjct 35270 GGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATTTTCTGGCTCAAGAAGCGAGGTCTCAT 35211
Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 102328
||| || || ||| ||||||||||| ||||||||||||||||| || ||| || ||
Sbjct 35210 GCCCGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTT 35151
Query 102329 TGC 102331
|||
Sbjct 35150 TGC 35148
>seq710
Length=40501
Score = 100 bits (110), Expect = 4e-16
Identities = 190/274 (69%), Gaps = 8/274 (3%)
Strand=Plus/Plus
Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123
||| || || || |||||||||| |||||| || ||| | || | | | || |
Sbjct 23836 GGCGTCGATTTCGTCAATGAAGATGATGCAGGGCGCATTCTTTCGGCCTTCCGCGAACAA 23895
Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 16182
|| || ||||| | |||||| |||||||||||||||||||| | | || ||
Sbjct 23896 GTCTCGCACACGAGAAGGGCCCACGCCAACAAACATCTCCACAAACTCAGAACCGCTCAC 23955
Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242
| || |||||| || ||| || || ||| |||| ||||||||| ||||| || |
Sbjct 23956 GCT-GAAGAAGGGCACGCCAGACTCTCCGGCAGTGGCCTTGGCGAGAAGCGTCTTTCCTG 24014
Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 16299
| ||||| || ||||| | |||||| || || |||||||| || |||| |||| |
Sbjct 24015 TTCCTGGAGGGCCGGCGAGAATGGCACCGCGAGGGATCTTGGCACCCAGCTTCTCAAACT 24074
Query 16300 ATCTCTCAGGTTGCTTAAGAAAATCCACAATCTC 16333
|||| |||||||| || ||| |||| |||
Sbjct 24075 ---TCTCGGGTTGCTTCAGGAAACTAACAAACTC 24105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620735533037200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |