Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq736 273 3e-68
>seq736
Length=134049
Score = 273 bits (302), Expect = 3e-68
Identities = 1105/1716 (64%), Gaps = 45/1716 (3%)
Strand=Plus/Minus
Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATAC-ACTTTTG 109565
||||| ||||| |||||||| |||||||||||||||||| | || ||| || |
Sbjct 48232 GACTGGGACTGGTCGATGAAAGCACCACGATCAGCCGCCATCTGGACGATTTGACGCTGA 48173
Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTT 109625
| || | |||||||| |||||||||| |||||| || ||||| |||| |||||
Sbjct 48172 GATA-TCTCCCAGACGGTCTTGTACAGGGCCTTGATGTCCTCGGGGATGTTGGGAATGTT 48114
Query 109626 TTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGAC 109685
|| || ||||| | | ||| | | |||||| | | ||||| || |||
Sbjct 48113 CTGGATGGAGCCGTTCTCGGCAATGATGCGGTTCTTCATGGCGTCAGACCACAGGCCGGT 48054
Query 109686 CTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCG 109745
| || || | | ||| |||||| || || ||||||||||| ||
Sbjct 48053 GTCGACCAGGTCCTTGAGAAGCCAAGGGTTGACAACCTGGAACTCACCAGCAAGGACACG 47994
Query 109746 TCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGC 109805
||| |||||||||| | |||||||| ||||| || || |||||||| || || || |
Sbjct 47993 TCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGAATCTGAGA 47934
Query 109806 AGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTAC 109865
|| || |||||||| ||||| | ||| | ||||| |||| ||| | | ||| |
Sbjct 47933 GGTACTGGCAGTGGGCATAGGAGCGACGAGCAAGCTGTTGCGGACACCGTGCTCCTTGAT 47874
Query 109866 CCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGT-CTCACCATCCCACA 109924
| |||| | | |||||| || |||| || || | |||||||
Sbjct 47873 CTGCTCCTTGAGGGAGTCCCACTC-------CCACAGGTCGGAGGGCTTGACGTCCCACA 47821
Query 109925 TATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCT 109984
| || || || | |||||||| ||||| || |||||||| || || | ||||
Sbjct 47820 TGTCGTACTGGAGGATACCCTCAGATGCAGGCGATCCCTTGAACGATTCATAGGGGCCCT 47761
Query 109985 CAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATAT 110044
| |||| ||| | ||| ||||| || || || ||||| || || ||||| || || |
Sbjct 47760 CGACCTTGGCAATCTCCATGGAAGCTTCAAGGGCGGCATGGTAAATGGTCTCGAAGATCT 47701
Query 110045 GAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGA-ATAAACACA 110103
| |||| ||||| ||| | | || ||||| |||| || || | ||| |
Sbjct 47700 GCTTGTTCAGCTCGCGAGCCTCGGGAGACTCAAAGGGCAGACG-CAGAGCGAGGAACGCG 47642
Query 110104 TCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCA 110163
|| || |||||||| ||||||| ||| || || || || |||||| | |||||
Sbjct 47641 TCAGCAAGACCCTGGACACCGACACCGATAGGTCGGTGGCGCATGTTGCTGTTGCGAGCC 47582
Query 110164 GTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTC 110223
|| |||||||| ||| ||||||| || ||||| || || |||
Sbjct 47581 TCCTCGACGGGGTAGTGGTTCACATCGATGATGCGGTTGAGGTTGCGGACGACCACCTTG 47522
Query 110224 GTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATT-GACATATTTGGG 110282
|||| ||| || || || | | | ||| | | | || || | |||| | |||
Sbjct 47521 GTGACTTCGTGAAGCTTCTTGAAGTCGTA-GCAGCCCTCGTTGTAGTCGACAAAGGCGGG 47463
Query 110283 GAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAAT 110342
|| || | ||| || | ||||| |||| |||||| | | ||| || | ||
Sbjct 47462 AAGGGCCAGAGAGGCCAAGTTGCAGACAGCGACCTCGTCGGGGGCACAGTACTCAATGAT 47403
Query 110343 TTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTT 110402
|| || || | ||| || || ||| |||||||||||||| || ||| |||
Sbjct 47402 CTCAGTGCAGAGGTTAGAGCTGCGGATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTT 47343
Query 110403 GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGC 110462
||| ||||| || |||||| | ||| ||||||| || ||||| | || || ||||
Sbjct 47342 GCAGTGGTCCTTGTAAAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCCAGGATGGA 47283
Query 110463 CTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519
| ||| | | || | | | ||| || | || | | | || ||| |||||||||
Sbjct 47282 GTACCACAGCTTCTGAG-CACGGATGGTCTTACG--ACCACGTCCCTCCCTCTCGTACTT 47226
Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT-GTCGG 110578
||||| ||||||| |||| ||||| |||| |||||| || || || ||
Sbjct 47225 TTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCAAGACCAGG-GCATTCGTTGG 47167
Query 110579 GACAGAAGAGGGACCAATTTCCACCCTC--CTCAACCCTCTTCATGAACAGGTCAGGAAT 110636
| || | ||| | ||| | ||| || ||| || | ||||||||| || || || ||
Sbjct 47166 GGCACATGAGCGTCCAGT--CCAAGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGAT 47109
Query 110637 CCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAG 110696
||||| || ||| | ||| ||| ||| |||| || | || ||||| ||| ||
Sbjct 47108 CCACAGAGCAAGGAACAAGTCGCGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAG 47049
Query 110697 CTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTT 110756
|| | ||||| | || || | |||||| || ||||| |||| || | || ||
Sbjct 47048 ATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACC--- 46992
Query 110757 ACGACGA------CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCAT 110810
| |||| || |||||| || || || || ||| |||||||| | |||||
Sbjct 46991 AGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCAGTGTTGTTGAAGACTCGCAGCAT 46932
Query 110811 AGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAAT 110870
|| ||||| || | ||| || || || || || ||| | ||||||| ||
Sbjct 46931 GGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCCAGTGGCACGGAT 46872
Query 110871 GTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGA 110929
| ||||| | || ||| || ||||| ||| ||| ||| |||||| ||| | |
Sbjct 46871 GCGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGAAATCATGGCACACGTCT-TCA 46813
Query 110930 GTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACA 110989
| || |||| ||||| ||||| || |||| || | | || ||||| || ||||
Sbjct 46812 GGGTGTCATAGATACCCTCAATGCTGTCGTCCTTCATGTCCACCAGGAAGCATGAGGACA 46753
Query 110990 TCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTT 111049
||| | | || || || ||||||||||| ||||| | || || ||| ||| |||
Sbjct 46752 GCTGGGCTTGCGGGGTGCCAGCATTGAAGAGGGTAGGGGAGGCGTGGGTGA--AGAACTT 46695
Query 111050 G--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGT--ACATCTTTACCGTGAATACCA 111105
| |||||| || |||||| ||||| | | | | | || | || || |||
Sbjct 46694 GCTGGACATGAGGTGGTATGTCTCGAGGAC--ACGCTCAATGTCGTCTCCCCAGATGCCA 46637
Query 111106 ATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGA 111165
| ||| |||||||| | ||| | ||| ||| |||| | ||| || || | | ||
Sbjct 46636 ACGGCCACTCGCATAATCATGTGTTGTGGCCGCTCGACAATCTTGCCGTCGAGCTTCAGA 46577
Query 111166 AGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201
||||| ||| || ||||||| |||||||||
Sbjct 46576 AGGTATGATCGCTCCAGCGTCTTGAAGCCAAAGTAT 46541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588969484453000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |