Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq736 273 3e-68 >seq736 Length=134049 Score = 273 bits (302), Expect = 3e-68 Identities = 1105/1716 (64%), Gaps = 45/1716 (3%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATAC-ACTTTTG 109565 ||||| ||||| |||||||| |||||||||||||||||| | || ||| || | Sbjct 48232 GACTGGGACTGGTCGATGAAAGCACCACGATCAGCCGCCATCTGGACGATTTGACGCTGA 48173 Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTT 109625 | || | |||||||| |||||||||| |||||| || ||||| |||| ||||| Sbjct 48172 GATA-TCTCCCAGACGGTCTTGTACAGGGCCTTGATGTCCTCGGGGATGTTGGGAATGTT 48114 Query 109626 TTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGAC 109685 || || ||||| | | ||| | | |||||| | | ||||| || ||| Sbjct 48113 CTGGATGGAGCCGTTCTCGGCAATGATGCGGTTCTTCATGGCGTCAGACCACAGGCCGGT 48054 Query 109686 CTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCG 109745 | || || | | ||| |||||| || || ||||||||||| || Sbjct 48053 GTCGACCAGGTCCTTGAGAAGCCAAGGGTTGACAACCTGGAACTCACCAGCAAGGACACG 47994 Query 109746 TCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGC 109805 ||| |||||||||| | |||||||| ||||| || || |||||||| || || || | Sbjct 47993 TCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGAATCTGAGA 47934 Query 109806 AGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTAC 109865 || || |||||||| ||||| | ||| | ||||| |||| ||| | | ||| | Sbjct 47933 GGTACTGGCAGTGGGCATAGGAGCGACGAGCAAGCTGTTGCGGACACCGTGCTCCTTGAT 47874 Query 109866 CCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGT-CTCACCATCCCACA 109924 | |||| | | |||||| || |||| || || | ||||||| Sbjct 47873 CTGCTCCTTGAGGGAGTCCCACTC-------CCACAGGTCGGAGGGCTTGACGTCCCACA 47821 Query 109925 TATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCT 109984 | || || || | |||||||| ||||| || |||||||| || || | |||| Sbjct 47820 TGTCGTACTGGAGGATACCCTCAGATGCAGGCGATCCCTTGAACGATTCATAGGGGCCCT 47761 Query 109985 CAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATAT 110044 | |||| ||| | ||| ||||| || || || ||||| || || ||||| || || | Sbjct 47760 CGACCTTGGCAATCTCCATGGAAGCTTCAAGGGCGGCATGGTAAATGGTCTCGAAGATCT 47701 Query 110045 GAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGA-ATAAACACA 110103 | |||| ||||| ||| | | || ||||| |||| || || | ||| | Sbjct 47700 GCTTGTTCAGCTCGCGAGCCTCGGGAGACTCAAAGGGCAGACG-CAGAGCGAGGAACGCG 47642 Query 110104 TCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCA 110163 || || |||||||| ||||||| ||| || || || || |||||| | ||||| Sbjct 47641 TCAGCAAGACCCTGGACACCGACACCGATAGGTCGGTGGCGCATGTTGCTGTTGCGAGCC 47582 Query 110164 GTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTC 110223 || |||||||| ||| ||||||| || ||||| || || ||| Sbjct 47581 TCCTCGACGGGGTAGTGGTTCACATCGATGATGCGGTTGAGGTTGCGGACGACCACCTTG 47522 Query 110224 GTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATT-GACATATTTGGG 110282 |||| ||| || || || | | | ||| | | | || || | |||| | ||| Sbjct 47521 GTGACTTCGTGAAGCTTCTTGAAGTCGTA-GCAGCCCTCGTTGTAGTCGACAAAGGCGGG 47463 Query 110283 GAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAAT 110342 || || | ||| || | ||||| |||| |||||| | | ||| || | || Sbjct 47462 AAGGGCCAGAGAGGCCAAGTTGCAGACAGCGACCTCGTCGGGGGCACAGTACTCAATGAT 47403 Query 110343 TTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTT 110402 || || || | ||| || || ||| |||||||||||||| || ||| ||| Sbjct 47402 CTCAGTGCAGAGGTTAGAGCTGCGGATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTT 47343 Query 110403 GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGC 110462 ||| ||||| || |||||| | ||| ||||||| || ||||| | || || |||| Sbjct 47342 GCAGTGGTCCTTGTAAAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCCAGGATGGA 47283 Query 110463 CTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 | ||| | | || | | | ||| || | || | | | || ||| ||||||||| Sbjct 47282 GTACCACAGCTTCTGAG-CACGGATGGTCTTACG--ACCACGTCCCTCCCTCTCGTACTT 47226 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT-GTCGG 110578 ||||| ||||||| |||| ||||| |||| |||||| || || || || Sbjct 47225 TTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCAAGACCAGG-GCATTCGTTGG 47167 Query 110579 GACAGAAGAGGGACCAATTTCCACCCTC--CTCAACCCTCTTCATGAACAGGTCAGGAAT 110636 | || | ||| | ||| | ||| || ||| || | ||||||||| || || || || Sbjct 47166 GGCACATGAGCGTCCAGT--CCAAGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGAT 47109 Query 110637 CCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAG 110696 ||||| || ||| | ||| ||| ||| |||| || | || ||||| ||| || Sbjct 47108 CCACAGAGCAAGGAACAAGTCGCGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAG 47049 Query 110697 CTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTT 110756 || | ||||| | || || | |||||| || ||||| |||| || | || || Sbjct 47048 ATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACC--- 46992 Query 110757 ACGACGA------CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCAT 110810 | |||| || |||||| || || || || ||| |||||||| | ||||| Sbjct 46991 AGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCAGTGTTGTTGAAGACTCGCAGCAT 46932 Query 110811 AGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAAT 110870 || ||||| || | ||| || || || || || ||| | ||||||| || Sbjct 46931 GGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCCAGTGGCACGGAT 46872 Query 110871 GTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGA 110929 | ||||| | || ||| || ||||| ||| ||| ||| |||||| ||| | | Sbjct 46871 GCGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGAAATCATGGCACACGTCT-TCA 46813 Query 110930 GTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACA 110989 | || |||| ||||| ||||| || |||| || | | || ||||| || |||| Sbjct 46812 GGGTGTCATAGATACCCTCAATGCTGTCGTCCTTCATGTCCACCAGGAAGCATGAGGACA 46753 Query 110990 TCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTT 111049 ||| | | || || || ||||||||||| ||||| | || || ||| ||| ||| Sbjct 46752 GCTGGGCTTGCGGGGTGCCAGCATTGAAGAGGGTAGGGGAGGCGTGGGTGA--AGAACTT 46695 Query 111050 G--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGT--ACATCTTTACCGTGAATACCA 111105 | |||||| || |||||| ||||| | | | | | || | || || ||| Sbjct 46694 GCTGGACATGAGGTGGTATGTCTCGAGGAC--ACGCTCAATGTCGTCTCCCCAGATGCCA 46637 Query 111106 ATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGA 111165 | ||| |||||||| | ||| | ||| ||| |||| | ||| || || | | || Sbjct 46636 ACGGCCACTCGCATAATCATGTGTTGTGGCCGCTCGACAATCTTGCCGTCGAGCTTCAGA 46577 Query 111166 AGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201 ||||| ||| || ||||||| ||||||||| Sbjct 46576 AGGTATGATCGCTCCAGCGTCTTGAAGCCAAAGTAT 46541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588969484453000