Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq736 210 3e-49 seq804 107 2e-18 seq710 91.5 2e-13 >seq736 Length=134049 Score = 210 bits (232), Expect = 3e-49 Identities = 966/1506 (64%), Gaps = 45/1506 (3%) Strand=Plus/Minus Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954 |||||||| | ||||| || || ||| | || | | |||||||| | |||||||| Sbjct 48026 GTTGACAACCTGGAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGG 47967 Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014 || |||||||| || || |||| || || | ||| ||| || ||||| || || | Sbjct 47966 CTCGAAGCATTCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTGGGCATAGGAGCGAC 47907 Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074 | | ||||| || | ||| | |||||||| | |||||||| ||||| || | Sbjct 47906 GAGCAAGCTGTTGCGGACACCGTGCTCCTTGATCTGCTCCTTGAGGGAGTCCCACTCCCA 47847 Query 106075 ---GTTG-AGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGG 106130 || | || || || || | ||||||| || | || || | || | || | | Sbjct 47846 CAGGTCGGAG---GGCTTGACGT-CCCACATGTCGTACTGGAGGATACCCTCAGATGCAG 47791 Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 106190 | || |||| || | ||||||| || | | | | || | || | || || | Sbjct 47790 GCGATCCCTTGAACGATTCATAGGGGCCCTCGACCTTGGCAATCTCCATGGAAGCTTCAA 47731 Query 106191 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 106250 ||| || || || ||||| || ||||| | |||| ||| || || || | Sbjct 47730 GGGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAGCCTCGGGAGACT 47671 Query 106251 CAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 106309 |||| | | || ||| | | || | || || ||||| || ||||| | ||| ||| Sbjct 47670 CAAAGG-GCAGACGCAGAGCGAGGAACGCGTCAGCAAGACCCTGGACACCGACACCGATA 47612 Query 106310 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 106369 |||| ||| ||||| || || || || ||| ||||| || || || ||| Sbjct 47611 GGTCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTCGACGGGGTAGTGGTTCACATCGATG 47552 Query 106370 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAA 106429 | ||||| || || | || | ||| |||| ||| ||||| || | | || | Sbjct 47551 ATGCGGTTGAGGTTGCGGACGACCACCTTGGTGACTTCGTGAAGCTTCTTGAAGTCGTAG 47492 Query 106430 GTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCC 106489 || | | | |||| | |||||||| | || ||||| ||||| ||||| Sbjct 47491 CAGCCCTCGTTGTAGTCGACAAAGGCGGGAAGGGCCAGAGAGGCCAAGTTGCAGACAGCG 47432 Query 106490 GTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTC 106549 ||| || | |||||| | || || || || | ||| || || || || Sbjct 47431 ACCTCGTCGGGGGCACAGTACTCAATGATCTCAGTGCAGAGGTTAGAGCTGCGGATGGTG 47372 Query 106550 CCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTC 106609 ||||| ||||| ||||| ||||| |||||| |||||||| |||||| |||| | Sbjct 47371 CCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAAGGGGTTA 47312 Query 106610 CCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGC 106668 || ||||| ||||| | || || || | | ||||| | || | | || |||| Sbjct 47311 CCAGTCTCGGTCTGGGCCTCCAGGATGGAGTACCACAGCTTCTGAGCACGG----ATGGT 47256 Query 106669 GTT--GGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCAC 106725 || | || ||||||||| |||||||||| ||| || || ||||||||||| || Sbjct 47255 CTTACGACCACGTCCCTCCCTCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCGCCGTA 47196 Query 106726 CGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCCTC-- 106782 ||| | ||||| || || || || || || | || | ||| | ||| || Sbjct 47195 GCAGTCAGCAAGACCAGG-GCATTCGTTGGGGCACATGAGCGTCCAGT--CCAAGTTCTT 47139 Query 106783 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTCTACACC 106841 ||| || ||||||||||| || || || |||||||| | | | || || || | | Sbjct 47138 CTCGACACGCTTCATGAAGAGATCGGGGATCCACAGAGCAAGGAACAAG-TCGCGGGCGC 47080 Query 106842 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 106901 || |||| || | || ||||| || | |||||||| || | || || ||||||| Sbjct 47079 GAACCTCCTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCC 47020 Query 106902 ATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACAT 106955 | ||||| || |||| || | | || ||||| ||| | || | || | Sbjct 47019 AGGGCTCGAGGTAGATGGCAAAGGCACCAG---GACGCTTGTTGCCACCCTGGTCGACGT 46963 Query 106956 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 107015 | || || ||| ||| || || || ||||| || ||||| || | || || || | Sbjct 46962 ATCGGGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGG 46903 Query 107016 TCCCC-CGAA-TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCC 107073 | || ||| || ||| | |||| | | |||| || || || || || || Sbjct 46902 TGCCGGCGATGTAGGAGCC--AGTGGCACGGATGCGGTGGACGTTCAGACCGATGCCACC 46845 Query 107074 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 107133 |||| ||| || || |||||| | | || || |||||||||| | || ||| Sbjct 46844 AGCCATCTTGGAAATCATGGCACACGTCTTCAGGGTGTCATAGATACCCTCAATGCTGTC 46785 Query 107134 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAA 107193 ||||| || | | |||||||| ||||| ||| | | || || ||||||||||| Sbjct 46784 GTCCTTCATGTCCACCAGGAAGCATGAGGACAGCTGGGCTTGCGGGGTGCCAGCATTGAA 46725 Query 107194 GAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAG 107251 |||||| || | ||||| ||| | | |||| |||||| || ||||||||| | | Sbjct 46724 GAGGGTAGGGGAGGCGTGGGTGA--AGAACTTGCTGGACATGAGGTGGTATGTCTCGAGG 46667 Query 107252 ACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGT 107311 ||| |||||||| || || |||||| | |||||| ||||||| ||||| ||| || Sbjct 46666 ACACGCTCAATGTCGTCTCCCCAGATGCCAACGGCCACTCGCATAATCATGTGTTGTGGC 46607 Query 107312 GTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGACC 107370 || | | |||| |||||| |||| || | || ||| || || |||| || Sbjct 46606 CGCTCGACAATCTTGCCGTCGAGCTTCAGAAGGTATGATC-GCTCCAGCGTCTTGAAGCC 46548 Query 107371 AAAGTA 107376 |||||| Sbjct 46547 AAAGTA 46542 >seq804 Length=175399 Score = 107 bits (118), Expect = 2e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| ||| ||| |||||||| || || || || || || || || ||| ||||| Sbjct 35147 GGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCC 35206 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| |||||||| | ||| |||| | | || | ||| ||||||||| Sbjct 35207 GGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGAT 35266 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451 |||||| ||| ||||| |||| || |||| ||| ||||| |||| |||| | | Sbjct 35267 ACCCTCGACAGCGGCAAAGGCAACGAGACGCTGGGCAAAGGA-CGAGTTCTTGTCCTGGA 35325 Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTT 117479 |||| || ||||| | |||||||| Sbjct 35326 TCCATCGAATCGCCCAGTCAGCCTTCTT 35353 >seq710 Length=40501 Score = 91.5 bits (100), Expect = 2e-13 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 9449 GCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACAT 9507 |||||| |||||||||||||||||||| | | || || | || |||||| || Sbjct 23914 GCCCACGCCAACAAACATCTCCACAAACTCAGAACCGCTCACGCT-GAAGAAGGGCACGC 23972 Query 9508 TAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGA 9567 ||| || || ||| |||| ||||||||| ||||| || || ||||| || |||| Sbjct 23973 CAGACTCTCCGGCAGTGGCCTTGGCGAGAAGCGTCTTTCCTGTTCCTGGAGGGCCGGCGA 24032 Query 9568 GGAGGGCACCCCGTGGAATCTTGGCGCC--ACTTC-CAAAGTATCTCTCAGGTTGCTTGA 9624 | | |||||| || || |||||||| || |||| |||| | |||| |||||||| | Sbjct 24033 GAATGGCACCGCGAGGGATCTTGGCACCCAGCTTCTCAAACT---TCTCGGGTTGCTTCA 24089 Query 9625 GAAAATCCACAATCTC 9640 | ||| |||| ||| Sbjct 24090 GGAAACTAACAAACTC 24105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589974273337400