Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq736 210 3e-49
seq804 107 2e-18
seq710 91.5 2e-13
>seq736
Length=134049
Score = 210 bits (232), Expect = 3e-49
Identities = 966/1506 (64%), Gaps = 45/1506 (3%)
Strand=Plus/Minus
Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954
|||||||| | ||||| || || ||| | || | | |||||||| | ||||||||
Sbjct 48026 GTTGACAACCTGGAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGG 47967
Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014
|| |||||||| || || |||| || || | ||| ||| || ||||| || || |
Sbjct 47966 CTCGAAGCATTCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTGGGCATAGGAGCGAC 47907
Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074
| | ||||| || | ||| | |||||||| | |||||||| ||||| || |
Sbjct 47906 GAGCAAGCTGTTGCGGACACCGTGCTCCTTGATCTGCTCCTTGAGGGAGTCCCACTCCCA 47847
Query 106075 ---GTTG-AGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGG 106130
|| | || || || || | ||||||| || | || || | || | || | |
Sbjct 47846 CAGGTCGGAG---GGCTTGACGT-CCCACATGTCGTACTGGAGGATACCCTCAGATGCAG 47791
Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 106190
| || |||| || | ||||||| || | | | | || | || | || || |
Sbjct 47790 GCGATCCCTTGAACGATTCATAGGGGCCCTCGACCTTGGCAATCTCCATGGAAGCTTCAA 47731
Query 106191 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 106250
||| || || || ||||| || ||||| | |||| ||| || || || |
Sbjct 47730 GGGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAGCCTCGGGAGACT 47671
Query 106251 CAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 106309
|||| | | || ||| | | || | || || ||||| || ||||| | ||| |||
Sbjct 47670 CAAAGG-GCAGACGCAGAGCGAGGAACGCGTCAGCAAGACCCTGGACACCGACACCGATA 47612
Query 106310 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 106369
|||| ||| ||||| || || || || ||| ||||| || || || |||
Sbjct 47611 GGTCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTCGACGGGGTAGTGGTTCACATCGATG 47552
Query 106370 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAA 106429
| ||||| || || | || | ||| |||| ||| ||||| || | | || |
Sbjct 47551 ATGCGGTTGAGGTTGCGGACGACCACCTTGGTGACTTCGTGAAGCTTCTTGAAGTCGTAG 47492
Query 106430 GTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCC 106489
|| | | | |||| | |||||||| | || ||||| ||||| |||||
Sbjct 47491 CAGCCCTCGTTGTAGTCGACAAAGGCGGGAAGGGCCAGAGAGGCCAAGTTGCAGACAGCG 47432
Query 106490 GTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTC 106549
||| || | |||||| | || || || || | ||| || || || ||
Sbjct 47431 ACCTCGTCGGGGGCACAGTACTCAATGATCTCAGTGCAGAGGTTAGAGCTGCGGATGGTG 47372
Query 106550 CCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTC 106609
||||| ||||| ||||| ||||| |||||| |||||||| |||||| |||| |
Sbjct 47371 CCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAAGGGGTTA 47312
Query 106610 CCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGC 106668
|| ||||| ||||| | || || || | | ||||| | || | | || ||||
Sbjct 47311 CCAGTCTCGGTCTGGGCCTCCAGGATGGAGTACCACAGCTTCTGAGCACGG----ATGGT 47256
Query 106669 GTT--GGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCAC 106725
|| | || ||||||||| |||||||||| ||| || || ||||||||||| ||
Sbjct 47255 CTTACGACCACGTCCCTCCCTCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCGCCGTA 47196
Query 106726 CGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCCTC-- 106782
||| | ||||| || || || || || || | || | ||| | ||| ||
Sbjct 47195 GCAGTCAGCAAGACCAGG-GCATTCGTTGGGGCACATGAGCGTCCAGT--CCAAGTTCTT 47139
Query 106783 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTCTACACC 106841
||| || ||||||||||| || || || |||||||| | | | || || || | |
Sbjct 47138 CTCGACACGCTTCATGAAGAGATCGGGGATCCACAGAGCAAGGAACAAG-TCGCGGGCGC 47080
Query 106842 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 106901
|| |||| || | || ||||| || | |||||||| || | || || |||||||
Sbjct 47079 GAACCTCCTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCC 47020
Query 106902 ATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACAT 106955
| ||||| || |||| || | | || ||||| ||| | || | || |
Sbjct 47019 AGGGCTCGAGGTAGATGGCAAAGGCACCAG---GACGCTTGTTGCCACCCTGGTCGACGT 46963
Query 106956 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 107015
| || || ||| ||| || || || ||||| || ||||| || | || || || |
Sbjct 46962 ATCGGGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGG 46903
Query 107016 TCCCC-CGAA-TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCC 107073
| || ||| || ||| | |||| | | |||| || || || || || ||
Sbjct 46902 TGCCGGCGATGTAGGAGCC--AGTGGCACGGATGCGGTGGACGTTCAGACCGATGCCACC 46845
Query 107074 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 107133
|||| ||| || || |||||| | | || || |||||||||| | || |||
Sbjct 46844 AGCCATCTTGGAAATCATGGCACACGTCTTCAGGGTGTCATAGATACCCTCAATGCTGTC 46785
Query 107134 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAA 107193
||||| || | | |||||||| ||||| ||| | | || || |||||||||||
Sbjct 46784 GTCCTTCATGTCCACCAGGAAGCATGAGGACAGCTGGGCTTGCGGGGTGCCAGCATTGAA 46725
Query 107194 GAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAG 107251
|||||| || | ||||| ||| | | |||| |||||| || ||||||||| | |
Sbjct 46724 GAGGGTAGGGGAGGCGTGGGTGA--AGAACTTGCTGGACATGAGGTGGTATGTCTCGAGG 46667
Query 107252 ACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGT 107311
||| |||||||| || || |||||| | |||||| ||||||| ||||| ||| ||
Sbjct 46666 ACACGCTCAATGTCGTCTCCCCAGATGCCAACGGCCACTCGCATAATCATGTGTTGTGGC 46607
Query 107312 GTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGACC 107370
|| | | |||| |||||| |||| || | || ||| || || |||| ||
Sbjct 46606 CGCTCGACAATCTTGCCGTCGAGCTTCAGAAGGTATGATC-GCTCCAGCGTCTTGAAGCC 46548
Query 107371 AAAGTA 107376
||||||
Sbjct 46547 AAAGTA 46542
>seq804
Length=175399
Score = 107 bits (118), Expect = 2e-18
Identities = 150/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| ||| ||| |||||||| || || || || || || || || ||| |||||
Sbjct 35147 GGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCC 35206
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392
||||||||||| |||||||| | ||| |||| | | || | ||| |||||||||
Sbjct 35207 GGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGAT 35266
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451
|||||| ||| ||||| |||| || |||| ||| ||||| |||| |||| | |
Sbjct 35267 ACCCTCGACAGCGGCAAAGGCAACGAGACGCTGGGCAAAGGA-CGAGTTCTTGTCCTGGA 35325
Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTT 117479
|||| || ||||| | ||||||||
Sbjct 35326 TCCATCGAATCGCCCAGTCAGCCTTCTT 35353
>seq710
Length=40501
Score = 91.5 bits (100), Expect = 2e-13
Identities = 141/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 9449 GCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACAT 9507
|||||| |||||||||||||||||||| | | || || | || |||||| ||
Sbjct 23914 GCCCACGCCAACAAACATCTCCACAAACTCAGAACCGCTCACGCT-GAAGAAGGGCACGC 23972
Query 9508 TAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGA 9567
||| || || ||| |||| ||||||||| ||||| || || ||||| || ||||
Sbjct 23973 CAGACTCTCCGGCAGTGGCCTTGGCGAGAAGCGTCTTTCCTGTTCCTGGAGGGCCGGCGA 24032
Query 9568 GGAGGGCACCCCGTGGAATCTTGGCGCC--ACTTC-CAAAGTATCTCTCAGGTTGCTTGA 9624
| | |||||| || || |||||||| || |||| |||| | |||| |||||||| |
Sbjct 24033 GAATGGCACCGCGAGGGATCTTGGCACCCAGCTTCTCAAACT---TCTCGGGTTGCTTCA 24089
Query 9625 GAAAATCCACAATCTC 9640
| ||| |||| |||
Sbjct 24090 GGAAACTAACAAACTC 24105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589974273337400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |