Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq877 134 3e-26
seq373 125 2e-23
seq764 120 7e-22
>seq877
Length=50207
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || ||| ||| || || || ||||| ||| || || | ||||| |||
Sbjct 31682 ACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 31623
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || || || ||||| || || ||||| || ||||| |||
Sbjct 31622 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 31563
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || |||||||| ||| ||||| |||||||| | ||||||
Sbjct 31562 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 31503
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 31502 CCCGTGAGGGTCTTGACGAAAATCTGCAT 31474
>seq373
Length=44988
Score = 125 bits (138), Expect = 2e-23
Identities = 156/211 (74%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTT 194989
||| ||||| |||||| ||| || || || ||||| ||| |||| || | || ||||
Sbjct 36810 AACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAG-GTACGACCGTCTT 36752
Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049
| ||||||||||| || ||||| | || || ||||| || || || || || ||||| |
Sbjct 36751 CCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCT 36692
Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCT 195109
|||| || ||||||||| || ||||| || || ||||||||| || |||| |||||
Sbjct 36691 GAATCTTCGACTTGACGTTGTCGATGGTATCAGATGATTCCACTTCCAGAGTAATCGTCT 36632
Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || |||| || || || || | |||||
Sbjct 36631 TACCCGTCAGTGTCTTAACAAAGATCTGCAT 36601
Score = 120 bits (132), Expect = 7e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || ||| ||| || || || ||||| ||| | ||| | || ||||| |||||
Sbjct 36576 GTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCGTCTTCCAGCTG 36517
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| ||||| || || || || ||||| |||||||| || || ||||| ||||| ||
Sbjct 36516 CTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTT 36457
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| ||||| || || || || || || ||||| | |||||||||||
Sbjct 36456 GGACTTGACGTTGTCAATAGTATCAGATGACTCGACCTCCAGGGTGATGGTCTTTCCTGT 36397
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | |||||
Sbjct 36396 GAGGGTCTTGACGAAAATCTGCAT 36373
>seq764
Length=87966
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| |||| || |||| ||||| |||||||||||||| ||||||||
Sbjct 48338 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATC 48397
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
| ||| || ||||| || |||||||| || ||||| || || || |||||| || ||
Sbjct 48398 AATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 48457
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| ||||| || || || |||||||| | ||||| || |||| || || |||||
Sbjct 48458 ATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 48516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109469019518795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |