Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq373 100 2e-16
seq877 98.7 6e-16
seq764 86.0 4e-12
>seq373
Length=44988
Score = 100 bits (110), Expect = 2e-16
Identities = 151/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCATCAT 34830
||||| ||| | ||||| || ||||| ||||| ||||| | |||| | || | || |
Sbjct 36810 AACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGG-TACGACCGTCTT 36752
Query 34831 CCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGC 34890
||||||| || || ||||| || | || |||||||| |||| | |||||||||||
Sbjct 36751 CCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCT 36692
Query 34891 TAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
||||||| |||||| | || | ||| | || || || | || || || |
Sbjct 36691 GAATCTTCGACTTGACGTTGTCGATGGTATCAGATGATTCCACTTCCAGAGTAATCGTCT 36632
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| ||||| || ||||| |||||||||||||||
Sbjct 36631 TACCCGTCAGTGTCTTAACAAAGATCTGCATA 36600
Score = 98.7 bits (108), Expect = 6e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCATCATC 34831
|||||||| | ||||| || ||||| ||||| ||||| | || | | || | || ||
Sbjct 36581 ACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAAG-TGCGGCCGTCTTC 36523
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||| || || || || || || || |||||||| | || | |||||||||||
Sbjct 36522 CAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTG 36463
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
|||||| |||||| | || | ||| | ||| || || | ||| ||||| ||
Sbjct 36462 AATCTTGGACTTGACGTTGTCAATAGTATCAGATGACTCGACCTCCAGGGTGATGGTCTT 36403
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||| ||||| ||||| || || |||||||||
Sbjct 36402 TCCTGTGAGGGTCTTGACGAAAATCTGCATA 36372
>seq877
Length=50207
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||||| || ||||| ||||| ||||| ||| | || |||| ||
Sbjct 31682 ACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 31623
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || |||||||| || || || |||||||| | || | ||||||||||| |
Sbjct 31622 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 31563
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | || | ||| || || | ||| || || ||
Sbjct 31562 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 31503
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|||||||| ||||| || || |||||||| ||
Sbjct 31502 CCCGTGAGGGTCTTGACGAAAATCTGCATCTT 31471
>seq764
Length=87966
Score = 86.0 bits (94), Expect = 4e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
||||| ||||| ||||| || ||| |||| |||| || ||||| || || || || ||
Sbjct 48338 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATC 48397
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
| ||| |||||||| | || | ||||||||||| ||||| ||||| |
Sbjct 48398 AATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 48457
Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAG 34973
|||| || || ||| || || | ||| ||||| || ||||| || |||||||| |||
Sbjct 48458 ATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAG 48517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324630098522280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |