Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq371 120 2e-22
seq510 82.4 6e-11
>seq371
Length=49181
Score = 120 bits (132), Expect = 2e-22
Identities = 151/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 29766 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTA 29825
||| || || | ||||| | ||||||||| |||| ||| | || | ||| || | |||
Sbjct 9280 GGGGAACGGCCGCGGCTCGCGCTCGAGCTGTGTCTGCAGGGCCTCGATGTGGTCGATGTA 9339
Query 29826 GACGTGAGCGTCTCCCAGGGTGTGGACAAA-CTCTCCCGGTTCTAGCCCGGTGACGTGAG 29884
|||||| |||||||||| | |||| | ||| ||||| | || || ||||| |
Sbjct 9340 GACGTGCGCGTCTCCCATGACGTGGGTGAGGCTC-CCCGGCACCAGATCGCACACGTGGG 9398
Query 29885 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 29944
| | ||||| |||||| || | |||||| || ||||| ||||| | |||||||||||||
Sbjct 9399 CGAGCATGTGCGTGAGCAGCGCGTAGCTCGCAATGTTGAAGGGGATGCCGAGCCCCATGT 9458
Query 29945 CCCCCGACCTCTGGTAGAGCTGACA 29969
| | |||| |||||| ||||| ||
Sbjct 9459 CGCAGGACCGCTGGTACAGCTGGCA 9483
Score = 100 bits (110), Expect = 2e-16
Identities = 190/274 (69%), Gaps = 8/274 (3%)
Strand=Plus/Plus
Query 30114 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 30173
|||||| || || ||| | || | |||||| | | ||| |||||| || || ||
Sbjct 9685 CAGCTGGTCGACGCCCTTGCCGGCGTAGTCGGTGTTGGCGTCGACGTACTCGGCGCCAAA 9744
Query 30174 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30233
|||| ||||||||| ||||| || || |||||||| || | || | |||| | | |||
Sbjct 9745 GTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGCGCCAGGCC 9804
Query 30234 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCTCG 30291
|||| | || || | ||| |||||| ||||||||||||| || || | || |
Sbjct 9805 GACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCGACGTCGCT 9864
Query 30292 GAGAGCTCTTTG--GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30349
||| || ||| | ||| | || ||||| || |||||| || ||||| | | |||||
Sbjct 9865 GAGGGC-CTTGGATGAGGTGTTG--CCCTC-GATGAACCAGAGGAGCTCGGCGATGACGG 9920
Query 30350 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
| ||||| | ||| || |||||||||||
Sbjct 9921 CGCGGAGGAAGACGCGCTTCGTGGTGAGGAGGGG 9954
>seq510
Length=17648
Score = 82.4 bits (90), Expect = 6e-11
Identities = 108/145 (74%), Gaps = 6/145 (4%)
Strand=Plus/Minus
Query 52051 AGATGGGCGACAAGTTTGCGTCGT-TCACGGCGCAAAAGGGGACGTGCGGAGCCGTCCTG 52109
|||| || |||||||||||||| |||||| |||||||| || || | | ||
Sbjct 13825 AGATTGGTGACAAGTTTGCGTCTCGTCACGGA-CAAAAGGGCACTATTGGTGTCA--CTT 13769
Query 52110 ACC--CAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACC 52167
||| |||||||||||||| ||| || || || | ||||||| ||||||||||||
Sbjct 13768 ACCGGCAGGAGGACATGCCGTTCACCAGAGAGGGAATTACGCCCGACATCATCATCAACC 13709
Query 52168 CCCACGCCTTTCCATCCAGGATGAC 52192
|||||||| |||| || | |||||
Sbjct 13708 CCCACGCCATTCCGTCTCGTATGAC 13684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408613192676105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |