Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq736 434 2e-116 seq804 232 1e-55 >seq736 Length=134049 Score = 434 bits (480), Expect = 2e-116 Identities = 1252/1888 (66%), Gaps = 100/1888 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || |||| || |||| ||| || || ||||||||||||||||| Sbjct 48367 ACGGTGAACTGGATAGGCGCAGCTGCGGCCTGGGTACGGAGGTAGTACATGCCGGTCTTG 48308 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 || || ||| ||||||| | |||||| |||| ||| |||| | || | Sbjct 48307 AGACCGAGCTT---CCAGCCGGTGAAGTGCAT-GCTGGTGA---TCTTGCCC---ATCGT 48258 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | | |||| | ||| |||||||| |||||| ||||| | | Sbjct 48257 GGGGTCCTTCATGTGG---------ATGTTTAGGGACTGGGACTGGTCGATGAAAGCACC 48207 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | ||||| ||||| | | ||| | | ||| || | |||||| ||||||||| | | Sbjct 48206 ACGATCAGCCGCCATCTGGACGATTTGACGCTGAGATATCTCCCAGACGGTCTTGTACAG 48147 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA- 212847 | |||| |||||| |||| | ||| |||||||| | || || || | | | || Sbjct 48146 GGCCTTGATGTCCTCGGGGATGTTGGGAATGTTCTGGATGGAGCC---GT-TCTCGGCAA 48091 Query 212848 -GCTGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGT 212904 | ||| | |||| | || ||| ||||| || ||||| ||||| || Sbjct 48090 TGATGCGGTTCTTCATGGCGTCAGACCACAGGCCGGTGTCGACCAGGTCCTTGAGAAGCC 48031 Query 212905 GAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGT 212964 ||||||||| | |||||| ||||| | || || | | |||||| | ||| || |||| Sbjct 48030 AAGGGTTGACAACCTGGAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGT 47971 Query 212965 AGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAG 213024 ||||||||| || |||||||| ||||||||||| | || ||||| |||||||| |||| Sbjct 47970 AGGGCTCGAAGCATTCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTGGGCATAGGAG 47911 Query 213025 CCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC--GAAGCTCTGCCCA 213082 | || || | ||||| | || |||||||| ||| | | || || | | Sbjct 47910 CGACGAGCAAGCTGTTGCGGACACCGTGCTCCTTGATCTG-CTCCTTGAGGG-------A 47859 Query 213083 GTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCC 213142 |||||| || ||| |||||| | ||| |||| ||||||||| |||| | ||| || Sbjct 47858 GTCCCA-CTCCCA--CAGGTCGGAGGGCTTGACGTCCCACATGTCGTACTGGAGGATACC 47802 Query 213143 TTT-GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGC 213201 | | | || | | |||| | | || |||||||| | ||||||| | ||| Sbjct 47801 CTCAGATGCAGGCGAT-CCCTTGAACGATTCATAGGGGCCCTCGACCTTGGCAATCTCCA 47743 Query 213202 AGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGG 213261 ||| || | ||||| || | ||| ||||| || || |||| | |||| |||| | Sbjct 47742 TGGAAGCTTCAAGGGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAG 47683 Query 213262 CCTCTGGGGACGTGAAGGGCATCATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGACC 213320 |||| || ||| ||||||| || ||| ||||| | ||||| || |||||||| Sbjct 47682 CCTCGGGAGACTCAAAGGGCAGACGCAGAGCGA-GGAACGCGTCAGCAAGACCCTGGACA 47624 Query 213321 CCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAA 213379 |||| ||||| |||| ||| | || ||| ||| |||| |||||| | |||||| Sbjct 47623 CCGACACCGATAGGTCGGTGGCGCATGTTGCTGTTGCGAGC-CTCCTCGACGGGGTAGTG 47565 Query 213380 GTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTA 213439 ||| |||||||| ||||||||||||| | |||| |||||||| | | || | Sbjct 47564 GTTCACATCGATGATGCGGTTGAGGTTGCGGACGACCACCTTGGTGACTTCGTGAAGCTT 47505 Query 213440 CTCGTGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCT 213493 || |||| |||||| || || | ||||| | || ||||| | Sbjct 47504 CT------TGAAGTCGTAGCAGCCCTCGTTGTAGTCGACAAAGGCGGGAAGGGCCAGAGA 47451 Query 213494 GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553 ||||| |||||| || || ||||| | | | | |||||| |||||||| ||||| || Sbjct 47450 GGCCAAGTTGCAGACAGCGACCTCGTCGGGGGCACAGTACTCAATGATCTCAGTGCAGAG 47391 Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCCT 213612 ||| || ||||||||||||| ||||| ||||| ||| ||| | |||| |||| Sbjct 47390 GTTAGAGCTGCGGATGGTGCCCAAGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGGTCCT 47332 Query 213613 TGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGT 213672 |||| |||||| ||||| || ||||| ||||| | |||| || | ||| || | Sbjct 47331 TGTAAAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCCAGGATGGAGTACCACAGCT 47272 Query 213673 ACCTGGCCTTGACCACCC---GCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAG 213728 | ||| ||| | || || | || | | | |||||||| |||||| Sbjct 47271 TC-------TGAGCACGGATGGTCTTACGACCACGTCCCTCCCTCTCGTACTTTTCGTAC 47219 Query 213729 AGCTCGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACAT 213787 || | | || || | ||| || | | | | || || || || ||| ||||| Sbjct 47218 AGAGCCTCAAACTCCTCGCCGTAGCAGTCAG-CAAGACCAGGGCATTCGTTGGGGCACAT 47160 Query 213788 GAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCG 213846 ||| |||||||| || | |||| ||| | || |||||| || || |||| |||||| | Sbjct 47159 GAGCGTCCAGTCCAAGTTCTTCTC-GACACGCTTCATGAAGAGATCGGGGATCCACAGAG 47101 Query 213847 CGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAA 213906 | ||||| ||| | || | ||| ||| || ||| ||||| ||||| || | Sbjct 47100 CAAGGAACAAGTCGCGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGATCAAGGA 47041 Query 213907 AGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCT 213963 ||||||||| ||| |||||||| ||||| | ||||||||||||||| || | || | | Sbjct 47040 AGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGT 46981 Query 213964 TGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCC 214023 |||| |||||||| || | ||| ||||||||| ||||| | ||| | | | Sbjct 46980 TGCCACCCTGGTCGACGTATCGGGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAATGC 46921 Query 214024 CGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGG 214083 ||||||| |||||||| || || || || ||||| | ||| | || ||| ||| Sbjct 46920 CGTTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCCAGTGGCAC---GGATGC-GGTGG 46865 Query 214084 A----GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCC 214139 | || || |||||||| || |||||| |||||||| || | ||| || || Sbjct 46864 ACGTTCAGACCGATGCCACCAGCCATCTTGGAAATCATGGCACACGTCTTCAGGGTGTCA 46805 Query 214140 ATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGC 214199 ||| || | |||||||| || | | || || || |||||| || |||| |||| Sbjct 46804 TAGATACCCTCAATGCTGTCGTCCTTCATGTCCACCAGGAAGCATGAGGACAGCT-GGGC 46746 Query 214200 CTG-GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAG 214258 || | | ||||| ||||| || || ||| ||| ||| | | |||||| | || | Sbjct 46745 TTGCGGGGTGCCAGCATTGAAGAGGGTAGGGGAGGCGTGGGTGAAGAACTTGCTGGACAT 46686 Query 214259 GAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCAC-C 214317 ||| ||| ||||| ||||| ||||||| ||| | || ||| | Sbjct 46685 GAGGTGGTATGTCTCGAGGACACGCTCAATGTCGTCTCCCCAGATGCCAACGGC-CACTC 46627 Query 214318 TCATCAGCATGTGCTGGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGG 214374 ||| | |||||| || |||| || | || || | | | ||| || ||||| | Sbjct 46626 GCATAATCATGTGTTGTGGCCGCTCGACAATCTTGCCGTCGAG---CTTCAGAAGGTATG 46570 Query 214375 AGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 | |||||||| |||||||| |||||||| Sbjct 46569 ATCGCTCCAGCGTCTTGAAGCCAAAGTA 46542 >seq804 Length=175399 Score = 232 bits (256), Expect = 1e-55 Identities = 568/849 (67%), Gaps = 24/849 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | |||||||||||||| ||||| || ||| || |||||||| Sbjct 34856 CTGGTAGTCGGCGACGCGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAAATGTTCTC 34915 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||| ||| |||||||||| | || |||||| | || ||| | | |||||| Sbjct 34916 CATAAAGTCAAAGGGGTTGGACGACTTGTACACCT-TCTCGTTGCCGAGAGCTACCAGCA 34974 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || ||||| |||| ||||| | ||||||| || ||||||||| | |||| Sbjct 34975 GGCGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTTGGAGTTCATGCCCAGCAGGG 35034 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 |||| ||| | || | |||||||| ||| || | ||||| || | || | Sbjct 35035 CGCAAGGCAGAGCTTCGGTCAAAAACTCCTGCTCGATGCGGACGGCGTCGGTGATGATGT 35094 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTT---GGCATAG---AGCATGC 48131 ||| || || || | |||| ||| ||| | | || |||| || Sbjct 35095 C----ACGAATCAC-CTCC---TTGCTGGCGC-GGTTCTTCAGGTGAGAGTGCAGCAGGC 35145 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 ||||||||||| |||||| || ||||| || ||||||| ||||||| ||| || | Sbjct 35146 AGGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGC 35205 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 | ||||||| || | || |||||||||||||| | || || | || |||||||| Sbjct 35206 CGGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGA 35265 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 | ||||| || || || || || ||| | || | || || | ||||||||| || Sbjct 35266 TACCCTCGACAGCGGCAAAGGCAACGAGACGCTGGGCAAAGGACGAGTTCTTGTCCTGGA 35325 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGA 48371 |||| || ||||||||| |||||||| ||||| || || ||||| ||||| || Sbjct 35326 TCCATCGAATCGCCCAGTCAGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGA 35385 Query 48372 AGAGCTTCTTGCACTCAC-CTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430 |||| | |||| || | ||| ||| | ||| || || ||| | |||| || Sbjct 35386 AGAGGTAGTTGCGCTGGCTGTGC-TCCTTGATATAAGTGTCGATGAGCAGGGAGTACGTC 35444 Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 || ||||| | ||||| || ||||||||| ||||| ||| | ||||| | | Sbjct 35445 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAAAAGCAGCGAGCCTCGGGGATC 35504 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || || || | ||| | ||| | ||| ||||| ||||| || || || || || || Sbjct 35505 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCGGCG 35564 Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTCCA 48606 |||||||| |||| || | ||| | ||||| | | | || || ||||| Sbjct 35565 AAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAG-GCGGTTGTTCCA 35623 Query 48607 GCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTT 48666 | | || | ||| ||| |||||| | || || | ||||||||||| || || || Sbjct 35624 GTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTT 35683 Query 48667 TTTGTACAT 48675 ||||||||| Sbjct 35684 TTTGTACAT 35692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931522494918400