Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq736 181 1e-40 seq804 107 2e-18 seq710 93.3 5e-14 >seq736 Length=134049 Score = 181 bits (200), Expect = 1e-40 Identities = 957/1503 (64%), Gaps = 39/1503 (3%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204 |||||||| |||| || || ||| || | || |||| |||||| |||| | | Sbjct 46542 TACTTTGGCTTCAAGACGCTGGAGC-GATCATACCTTCTGAAGCTCGACGGCAAGATTGT 46600 Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 || ||||| ||||| | ||||| || || | |||||| || || |||||||| Sbjct 46601 CGAGCGGCCACAACACATGATTATGCGAGTGGCCGTTGGCATCTGGGGAGACGACATTGA 46660 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCA 75322 |||| | ||||||||| || |||||| |||| | | ||| ||||| | || Sbjct 46661 GCGTGTCCTCGAGACATACCACCTCATGTCCAGCAAGTTCT--TCACCCACGCCTCCCCT 46718 Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 ||||||||||||||||| || || | | ||| ||||| |||||||| | | || Sbjct 46719 ACCCTCTTCAATGCTGGCACCCCGCAAGCCCAGCTGTCCTCATGCTTCCTGGTGGACATG 46778 Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442 ||||| ||| || | |||||||||| || || | | |||||| || || ||| Sbjct 46779 AAGGACGACAGCATTGAGGGTATCTATGACACCCTGAAGACGTGTGCCATGATTTCCAAG 46838 Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA-TTCG 75501 |||||| || || || || || |||| | | |||| | ||| || ||| Sbjct 46839 ATGGCTGGTGGCATCGGTCTGAACGTCCACCGCATCCGTGCCACT--GGCTCCTACATCG 46896 Query 75502 -GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 75560 || || || || || | || ||||| || ||||| || || || ||| ||| | Sbjct 46897 CCGGCACCAACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAACACTG 46956 Query 75561 CGCGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGG 75614 | || || || | || | || ||||| || || | || ||||| | | Sbjct 46957 CCCGATACGTCGACCAGGGTGGCAACAAGCGTC---CTGGTGCCTTTGCCATCTACCTCG 47013 Query 75615 AACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAG 75674 | || ||||| ||||| || | || |||||||| | || ||||| || | || | Sbjct 47014 AGCCCTGGCACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAGAACCACGGCAAGGAGG 47073 Query 75675 AGGCTCGGTGTAGAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGG 75733 ||| ||| | || || || | | | |||||||| || || || ||||||||||| Sbjct 47074 AGGTTCGCGCCCGCGA-CTTGTTCCTTGCTCTGTGGATCCCCGATCTCTTCATGAAGCGT 47132 Query 75734 GTTGAG--GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCC 75790 || ||| || ||| | ||| | || | || || || || || || ||||| | Sbjct 47133 GTCGAGAAGAACTTGG--ACTGGACGCTCATGTGCCCCAACGAATGC-CCTGGTCTTGCT 47189 Query 75791 GACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCC 75850 ||| || ||||||||||| || || ||| |||||| || |||||| | | Sbjct 47190 GACTGCTACGGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGGGAGGGACGTGGT 47249 Query 75851 AATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGAC 75909 | ||| | || | | || | | ||| | | || || | | ||||| ||||| Sbjct 47250 CGTAAGACCAT-CCGTGCTCAGAAGCTGTGGTACTCCATCCTGGAGGCCCAGACCGAGAC 47308 Query 75910 TGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTT 75969 ||| | || | |||||||||||||| || ||| ||||| ||||| ||||| || Sbjct 47309 TGGTAACCCCTTCATGCTTTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACTT 47368 Query 75970 GGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGA 76029 ||| || ||| ||||| || || ||||| || || | |||||| | || || Sbjct 47369 GGGCACCATCCGCAGCTCTAACCTCTGCACTGAGATCATTGAGTACTGTGCCCCCGACGA 47428 Query 76030 GACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCG 76089 | ||||| ||||| ||||| || | |||||||| | |||| | | | | Sbjct 47429 GGTCGCTGTCTGCAACTTGGCCTCTCTGGCCCTTCCCGCCTTTGTCGACTACAACGAGGG 47488 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 | | || | | || ||||| ||| |||| ||| | || | || || ||||| Sbjct 47489 CTGCTACGACTTCAAGAAGCTTCACGAAGTCACCAAGGTGGTCGTCCGCAACCTCAACCG 47548 Query 76150 AGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 |||| || || || ||||| ||| || || || || ||||| ||| | Sbjct 47549 CATCATCGATGTGAACCACTACCCCGTCGAGGAGGCTCGCAACAGCAACATGCGCCACCG 47608 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCAT 76268 |||||| ||| | ||||| || ||||| || || | || | | ||| || | | | Sbjct 47609 ACCTATCGGTGTCGGTGTCCAGGGTCTTGCTGACGCGTTCCTCGCTCTGCGTCTGC-CCT 47667 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 |||| || || || ||| |||| | ||||| || ||||| || || || Sbjct 47668 TTGAGTCTCCCGAGGCTCGCGAGCTGAACAAGCAGATCTTCGAGACCATTTACCATGCCG 47727 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 |||| || || || | || | | | | || ||||||| | || |||| | Sbjct 47728 CCCTTGAAGCTTCCATGGAGATTGCCAAGGTCGAGGGCCCCTATGAATCGTTCAAGGGAT 47787 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT-CAAC 76447 | || || || | || | || |||| || ||||||| | || || || || | || Sbjct 47788 CGCCTGCATCTGAGGGTATCCTCCAGTACGACATGTGGG-ACGTCAAGCC---CTCCGAC 47843 Query 76448 ---TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504 | || ||||| |||||||| | ||||||||| | ||| | || ||||| | Sbjct 47844 CTGTGGGAGTGGGACTCCCTCAAGGAGCAGATCAAGGAGCACGGTGTCCGCAACAGCTTG 47903 Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564 | | || || ||||| || ||| ||| | || || |||| || || |||||||| Sbjct 47904 CTCGTCGCTCCTATGCCCACTGCCAGTACCTCTCAGATTCTGGGCAACAACGAATGCTTC 47963 Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624 || || ||||| | |||||||||| | || | ||| || |||||||| ||||| Sbjct 47964 GAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTTGCTGGTGAGTTCCAGGTTGTC 48023 Query 76625 AAC 76627 ||| Sbjct 48024 AAC 48026 >seq804 Length=175399 Score = 107 bits (118), Expect = 2e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| || |||| | | |||| |||| ||||| ||| |||| Sbjct 35353 AAGAAGGCTGACTGGGCGATTCGATGGATCCAGGACAAGAACTCG-TCCTTTGCCCAGCG 35295 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 || |||| ||||| ||| ||||||||||||||| ||| | || | | |||| Sbjct 35294 TCTCGTTGCCTTTGCCGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATTTT 35235 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| ||||||||||| ||||| ||| || || || || || || || Sbjct 35234 CTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCTCG 35175 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCC 65229 || |||||||| ||| ||| |||||| Sbjct 35174 TGACGAGGGTCTGCACACGGACTTTGCC 35147 >seq710 Length=40501 Score = 93.3 bits (102), Expect = 5e-14 Identities = 142/196 (72%), Gaps = 10/196 (5%) Strand=Plus/Minus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTG-GAAGT--GGTGCCAAGATC 175287 ||| |||| ||| || ||||||||||||| | |||| |||| |||||||||||| Sbjct 24105 GAGTTTGTTAGTTTCCTGAAGCAACCCGAGA---AGTTTGAGAAGCTGGGTGCCAAGATC 24049 Query 175288 CCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCC 175347 || || || ||| ||||||| || ||||| || |||||||| || |||||| ||| Sbjct 24048 CCTCGCGGTGCCATTCTCGCCGGCCCTCCAGGAACAGGAAAGACGCTTCTCGCCAAGGCC 23989 Query 175348 ATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CAAACTTTGTGGAGA 175405 | || || || || || || ||| | ||| | | || | | | |||||||||| Sbjct 23988 ACTGCCGGAGAGTCTGGCGTGCCCTTC-TTCAGCG-TGAGCGGTTCTGAGTTTGTGGAGA 23931 Query 175406 TGTTTGTTGGTGTGGG 175421 |||||||||| ||||| Sbjct 23930 TGTTTGTTGGCGTGGG 23915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596563000448800