Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq373 95.1 2e-14 >seq373 Length=44988 Score = 95.1 bits (104), Expect = 2e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972 |||| |||| || ||||||||||| || || | ||| |||||||| || || || || | Sbjct 36757 CGTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATACCCTCCT 36698 Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAA 172032 | || || || || || || || || ||||| || ||||| ||||| ||||||| Sbjct 36697 TGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGATGATTCCACTTCCAGAGTAA 36638 Query 172033 TGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || ||||| || | ||| |||| || |||||||| Sbjct 36637 TCGTCTTACCCGTCAGTGTCTTAACAAAGATCTGCAT 36601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905125986933000