Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq804 154 4e-32
seq744 143 8e-29
seq510 114 4e-20
seq736 102 2e-16
>seq804
Length=175399
Score = 154 bits (170), Expect = 4e-32
Identities = 248/354 (70%), Gaps = 2/354 (1%)
Strand=Plus/Minus
Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364
|||| || || |||||| || | ||||| |||||| || ||||| || || |
Sbjct 35499 CCGAGGCTCGCTGCTTTTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACGT 35440
Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACG 133424
| || || || || ||||| ||||| || | |||| || | || |||||||
Sbjct 35439 ACTCCCTGCTCATCGACACTTATATCAAGGAGCACAGCCAGCGCAACTACCTCTTCAACG 35380
Query 133425 CCATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAG 133483
||||| | || ||||||| ||| ||||| |||||||||| ||| ||||||||||
Sbjct 35379 CCATT-GAGACCATTCCTTGCATTCGCAAGAAGGCTGACTGGGCGATTCGATGGATCCAG 35321
Query 133484 GACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttt 133543
|||||| || ||||| ||||||||||| ||||| | || ||||| || ||
Sbjct 35320 GACAAGAACTCGTCCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCTGTCGAGGGTATCTTC 35261
Query 133544 ttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTG 133603
||||| ||||| || ||| ||||| ||||| || ||||| ||| | | || || |||
Sbjct 35260 TTCAGCGGTGCCTTTGCCTCCATTTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTG 35201
Query 133604 TGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657
||||| ||||| || || || | ||||||| || ||||| || ||||||
Sbjct 35200 ACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTTTGCC 35147
>seq744
Length=46994
Score = 143 bits (158), Expect = 8e-29
Identities = 197/273 (72%), Gaps = 2/273 (1%)
Strand=Plus/Minus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
||||||| | ||||| | ||| |||||||| ||||| || || ||| || || ||
Sbjct 17720 TCTTCCAGAGCCTTGACCAGACGTCGCTGAATGTAACCTGTCTCAGCTGTCTTGACGGCC 17661
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTA-G 302690
|||||||| ||||| |||||||| |||| || |||||||| | ||| ||| |||| |
Sbjct 17660 GTATCAATGAGACCTTCACGACCAGCCATGGCGTGGAAGAAGAACTCGGTCGG-CGTAAG 17602
Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750
|| | | | | ||| |||| || |||||||| |||||||| || | || ||||||
Sbjct 17601 GCCACGCAGATACGAGTTCTCCACAAAACCACGAGCCTCGGGTGAGTAATCATCCTTGGT 17542
Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810
|| || ||||| || | | | |||| | || ||||||||||| || || ||||
Sbjct 17541 GAAATGAGGCAGAGTGCGATATTTGAAGCCAAACGGAATACGCTTTCCTTCGACAATCTG 17482
Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|||||||| | || ||||||| ||||| ||
Sbjct 17481 CTGTCCCACGAGCGCTGTCATCTGAGAAATGTT 17449
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | |||||| ||||| | || ||||| |||||| | |||||||||
Sbjct 18497 AGAATTTCCTTGAGACGGGGCACACCGAGCGTGACGTT---CTTGGAAGACACACCAGCA 18441
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|||||||| || |||||||| | || |||| |||||||| || || |||||||
Sbjct 18440 AAGTGGAAGGTGTTCAGAGTCATCTGCGTAGCAGGCTCACCGATGGACTGAGCCGCAAGG 18381
Query 301933 ATACCAACCATTTCTCCTGG 301952
| ||| |||||||| || ||
Sbjct 18380 ACACCCACCATTTCACCGGG 18361
>seq510
Length=17648
Score = 114 bits (126), Expect = 4e-20
Identities = 338/512 (66%), Gaps = 18/512 (4%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| ||||||| |||||| ||||||||||||||||| ||||| || |||||||| || ||
Sbjct 13321 GCTCCGTGTGCAATCATGCAATCACGCTCCATTTCTCCGAATCGCAGACCACCGTCTCGG 13380
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
|| | |||||| | ||||| || || | | || ||||| || ||| ||
Sbjct 13381 GCACGACCCTCCACCGGCTGTCGCGTCATGATCTGCACCGGACCACGGGCACGGGCGTGG 13440
Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTC 251664
||| || | ||||| || ||| ||||||||| ||| || || | ||||| ||
Sbjct 13441 ATCTTGTCGTCCACCATGTGGCGGAGTCGCTGGTAGTATGTTGGTCCAAAGAAGAC-CTG 13499
Query 251665 GAAGGCATTTGCTCTC---CAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTCA 251721
| | | | ||| | | || || | || ||||| | ||| || ||| |
Sbjct 13500 G--GCCCTCAGCTTGCGGCCCGTGTGACCATTGTACATGATCTCGAAGCCTCGAGACTGG 13557
Query 251722 TAACCAAGTTT---CTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTG 251778
|| || | || | | ||||| ||| | || | | ||| | | |||| |
Sbjct 13558 TAGCCGTGCTTTCGCAGCAGCTCCGAAACCGAGTCGAC---CGTGACATCGGTAAAGGGG 13614
Query 251779 GTGCCGTCTCCGTAAAGACCCATTTGAA--TCAACACTTTGCCTAAAAGTGTCTCTTTCA 251836
|| | || || | | |||| | || | | || |||| || || ||| |||
Sbjct 13615 GTAGCATCACCCTCCATACCC--TCCAACGTAGAGACCTTGCTTAGGAGACACTCAATCA 13672
Query 251837 GTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCA 251896
|| ||||| ||||||||| ||||| || ||||| ||||||||||||||||| | |
Sbjct 13673 AGTGAGCGATTGTCATACGAGACGGAATGGCGTGGGGGTTGATGATGATGTCGGGCGTAA 13732
Query 251897 GTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTT 251955
||| || ||||| ||||| |||| | | | ||| || |||||||| ||||||
Sbjct 13733 TTCCCTCTCTGGTGAACGGCATGTCCTCCTGC-CGGTAAGTGACACCAATAGTGCCCTTT 13791
Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||||||||||| ||||| ||||||||
Sbjct 13792 TGTCCGTGACGAGACGCAAACTTGTCACCAAT 13823
>seq736
Length=134049
Score = 102 bits (112), Expect = 2e-16
Identities = 332/512 (65%), Gaps = 13/512 (3%)
Strand=Plus/Minus
Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699
|||||| ||| |||||||| || ||||||||| || ||||||||||| || | |
Sbjct 47404 ATCTCAGTGCAGAGGTTAGAGCTGCGGATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGG 47345
Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759
|| || |||||||| || ||| | ||| | || ||||| |||| || ||||| ||
Sbjct 47344 TTGCAGTGGTCCTTGTAAAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCCAGGATG 47285
Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATA--TT 155817
||| || | | ||| || ||| | || ||| ||| || ||
Sbjct 47284 GAGTACCACAGCTTCTGAGCACGGATGGTCTTACGACCACGTCCCTCCCTCTCGTACTTT 47225
Query 155818 TCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGG 155877
|| || | ||| | | ||||| ||||| || ||| || |||||||| | | ||
Sbjct 47224 TCGTACAGAGCCTCAA--ACTCCTCGCCGTAGCAGTCAGCAAGACCAGGGCATTCGTTGG 47167
Query 155878 GGCAAAACAGCGACCAA---ATTTTATTACCGATTACACGCTCCATAAATACATCACTCG 155934
|||| | |||| ||| | || || ||| |||||| ||| || | |||
Sbjct 47166 GGCACATGAGCGTCCAGTCCAAGTTCTTCTCGA---CACGCTTCATGAAGAGATCGGGGA 47110
Query 155935 CCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTA 155994
||| | |||| ||| | ||| | || |||||| | |||||| ||||| || |
Sbjct 47109 TCCACAGAGCAAGGAACAAGTCGCGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGA 47050
Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCAT 156054
| || | ||| || | || | || ||||| || || || ||||| ||||
Sbjct 47049 GATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAG 46990
Query 156055 TCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111
| |||| |||||||| || || || || ||||| || |||||||| | ||||| |
Sbjct 46989 GACGCTTGTTGCCACCCTGGTCGACGTATCGGGCAGTGTTGTTGAAGACTCGCAGCATGG 46930
Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCG 156143
| ||||| || ||||| ||||| ||||| |||
Sbjct 46929 GGATAATGCCGTTGGAGGTGCCGTTGGTGCCG 46898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471800910968245
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