Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq736 248 8e-61
seq373 102 7e-17
>seq736
Length=134049
Score = 248 bits (274), Expect = 8e-61
Identities = 1108/1729 (64%), Gaps = 56/1729 (3%)
Strand=Plus/Minus
Query 138303 CTGATCGATGAAAGCGCCTCGATCAATGGCCATGTTAATTAAATTTTTACTTTTC---AT 138359
||| ||||||||||| || |||||| ||||| | | | ||| || | ||
Sbjct 48224 CTGGTCGATGAAAGCACCACGATCAGCCGCCATCTGGACGA---TTTGACGCTGAGATAT 48168
Query 138360 CTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTGTTGC-AATATTTTGAA 138418
|||||| ||||||||||| || | || | | ||| ||||| ||| || || |
Sbjct 48167 CTCCCAGACGGTCTTGTACAGGGCCTTGATGTC-CTCGGGGATGTTGGGAATGTTCTGGA 48109
Query 138419 TGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTGA 138478
|| ||||| | ||||||||||| || ||||| | || |||| | ||
Sbjct 48108 TGGAGCCGTTCTCGGCAATGATGCGGTTCTTCATGGCGTCAGACCACAGGCCGGTGTCGA 48049
Query 138479 TCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAA 138538
|| ||| || | || | ||| | ||||| || ||||| || | || || ||
Sbjct 48048 CCAGGTCCTTGAGAAGCCAAGGGTTGACAACCTGGAACTCACCAGCAAGGACACGTCGCT 47989
Query 138539 CGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGG 138598
||| |||||| |||| | ||||| || |||||||||| ||||||||||||| ||
Sbjct 47988 GGTAGATGTTGGAGGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGAATCTGAGAGGTAC 47929
Query 138599 TCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTT 138658
| || || ||||| || || | | || || | |||||| |||||| | |
Sbjct 47928 TGGCAGTGGGCATAGGAGCGACGAGCAAGCTGTTGCGGACACCGTGCTCCTTGATCTGCT 47869
Query 138659 CCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTA 138718
||||||| || ||| ||||||| ||| || || || |||||| |||||||| |
Sbjct 47868 CCTTGAGGGAGTCCCACTCCCACAGGTCGGAGGGCTTGACGTCCCACATGTCGTACTGGA 47809
Query 138719 ACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTA--TACACCAAACTCTTGCGC 138776
|| ||| | ||| || || | | |||| || || | | || |||| ||
Sbjct 47808 GGATACCCTCAGATGCAGGCGATCCCTTGAACGATTCATAGGGGCCCTCGAC-CTTG-GC 47751
Query 138777 CAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAG 138836
| ||| || || || || || ||| |||||| || ||| ||||||| || ||
Sbjct 47750 AATCTCCATGGAAGCTTCAAGGGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAG 47691
Query 138837 CAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCG-TGAACGCGTCGGCCAGCC 138895
| || ||||||| ||| | |||| || || | || ||||||||| || || |
Sbjct 47690 CTCGCGAGCCTCGGGAGACTCAAAGGGCAGACGCAG-AGCGAGGAACGCGTCAGCAAGAC 47632
Query 138896 CTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG----GCTTCG 138951
| || || || || |||| ||| || ||||||| || ||| ||||| | |||
Sbjct 47631 CCTGGACACCGACACCGATAGGTCGGTGGCGCA----TGTTGCTGTTGCGAGCCTCCTCG 47576
Query 138952 ATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTA 139011
| || || | ||| ||||||||||| ||| | || || ||||||||||| || |
Sbjct 47575 ACGGGGTAGTGGTTCACATCGATGATGCGGTTGAGGTTGCGGACGACCACCTTGGT-GAC 47517
Query 139012 TGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTT 139070
| | | || | | | || ||||| |||| |||||| |||||| | | || ||
Sbjct 47516 TTCGTGAAGCTTCTTGAAGTCGTAGCAGCCCTCGTTGTAGTCGACAAAGGCGGGAA---- 47461
Query 139071 GTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGAC 139130
| || | ||||| | |||||| || || || ||||||||| | | ||| || |
Sbjct 47460 -GGGCCAGA----GAGGCCAAGTTGCAGACAGCGACCTCGTCGGGGGCACAGTACTCAAT 47406
Query 139131 AATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCG 139190
|| || | || | ||| | ||| || || || || | || ||||| || ||
Sbjct 47405 GATCTCAGTGCAGAGGTTAGAGCTGCGGATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCG 47346
Query 139191 GTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT 139250
||| || || ||||||||||| | || | ||||| || || | ||| | ||
Sbjct 47345 GTTGCAGTGGTCCTTGTAAAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCCAGGAT 47286
Query 139251 GAATTTGAACAAGTCCCTAGCTTGTATTTGACGCACG-TAAAGTTCGTCGCGCTCGTACT 139309
| | | ||| | | ||| | | | | | ||| | || | || | ||||||||
Sbjct 47285 GGAGTACCACAGCTTCTGAGCACGGA-TGGTCTTACGACCACGTCCCTCCCTCTCGTACT 47227
Query 139310 TTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAG 139369
||||||| || | || || || |||||| ||||| |||| | | || | || |
Sbjct 47226 TTTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCAAGACCAGGGCATTCGTTGG 47167
Query 139370 GACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCC 139429
| |||||||||| ||| | |||| || ||| ||| ||||||| ||||| || ||||
Sbjct 47166 GGCACATGAGCGTCCAGTCCAAGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCC 47107
Query 139430 ACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--AT 139487
||| ||| | | ||| ||||| || || ||| || ||| || | |
Sbjct 47106 ACAGAGCAAGGAACAAGTCGCGGGCGCGAACCTCCTCCTTGCCGTGGTT--CTTGCGGAG 47049
Query 139488 GTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTT 139547
| |||||| ||||| ||||| |||||||| || || || |||||||| | || ||
Sbjct 47048 ATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGG 46989
Query 139548 CCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGG 139604
|| |||||||| || ||||||| ||| ||| || ||||| || |||| ||| ||
Sbjct 46988 ACGCTTGTTGCCACCCTGGTCGACGTATCGGGCAGTGTTGTTGAAGACTCGCAGCATGGG 46929
Query 139605 CTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA-CTGTTGCGAGCTCGGAC 139661
| ||| | | || |||||||||| |||| ||| | || || ||||
Sbjct 46928 GATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCCAGTG---GCACGGAT 46872
Query 139662 GTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGT-- 139719
| || || || | ||||| || || | | ||||| || | ||| || |
Sbjct 46871 GCGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGAAAT--CATGGCACACGTCTTC 46814
Query 139720 AATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAA 139779
| || || || ||||| ||||||||||||| ||| ||||| |||||||| ||
Sbjct 46813 AGGGTGTCATAGATACCCTCAATGCTGTCGTCCTTCATGTCCACCAGGAAGCATGAGGAC 46754
Query 139780 AGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGT 139839
|| || | | | ||||| || || || ||||| ||||| ||||| | |
Sbjct 46753 AGCTGGGCTTGCGGGGTGCCAGCATTGAAGAGGGTAGGGGAGGCGTGGGTGAAGAACTTG 46694
Query 139840 TTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACA 139899
| ||||| | | ||| || |||| | | | | |||| || ||| ||| || ||
Sbjct 46693 CTGGACATGAGGTGGTATGTCTCGAGGACACGCTCAATGTCGTCTCCCCAGATGCCAACG 46634
Query 139900 GAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAG- 139958
| |||||||| | ||| ||||| ||| ||| | | | ||| |||| || ||
Sbjct 46633 GCCACTCGCATAATCATGTGTTGTGGCCGCTCGACAATCTTGCCGTCGAGCTTCAGAAGG 46574
Query 139959 -ATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
|| | || ||| || |||||| |||||||||| |||||||| ||
Sbjct 46573 TATGATCG--CTCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTC 46527
>seq373
Length=44988
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || ||||| || || | ||
Sbjct 35859 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCC 35918
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || ||||| || ||
Sbjct 35919 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAG 35978
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | |||||||| || || ||||| ||||| ||| | | || || || |||
Sbjct 35979 CAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGCCGAACCCTCTCCGACTACAAC 36038
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| || || || ||| ||||
Sbjct 36039 ATCCAGAAGGAGTCTACCCTCCACCTGGT 36067
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| |||| || || || ||||| || ||||| || ||||| ||| | |
Sbjct 36601 ATGCAGATCTTTGTTAAGACACTGACGGGTAAGACGATTACTCTGGAAGTGGAATCATCT 36660
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || ||||| || || || || || || ||
Sbjct 36661 GATACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCAG 36720
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858
|| || ||||||||||| || || |||||||| ||
Sbjct 36721 CAGCGCTTGATCTTTGCTGGTAAGCAGCTGGAAGA 36755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449892623007800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |