Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq55 141 8e-29 >seq55 Length=15346 Score = 141 bits (156), Expect = 8e-29 Identities = 224/319 (70%), Gaps = 4/319 (1%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGT--CACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAA 34375 || ||||| ||||| | ||| || | || | |||||||||| |||||| ||||| | Sbjct 1539 TCGGTCTCAGGGTTCTTGCACTTTTTG--CAGAGCACAAACTTGTTGATGAAGCCATCGA 1596 Query 34376 GCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGT 34435 | ||||||| | ||| ||| ||||||| |||||||| || | || |||| ||| Sbjct 1597 GGTGGTCCTGCAGCTTGGCGGCATCGTGGGCGCCGTTGATAATCCAACGGTCGTCCTTGG 1656 Query 34436 AATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCG 34495 || | | || || || || |||||| | || |||||||| | || | | | Sbjct 1657 GGTCAATGTTGGTCTGAGCACCGAGCTCGAAACCAAAGTACTTGATGACATAGGAGCCAG 1716 Query 34496 GACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGC 34555 |||| |||| | || ||||| ||||| |||||||| ||||||||||||||||||| Sbjct 1717 GACGGGCAAGGGACTGGGCGACGCTGGGCAGGTTGACGACAACAGTCTTGATGCCGTTGC 1776 Query 34556 CCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCA 34615 | || ||||| | ||||| |||||| ||| |||||||| ||||| || || | Sbjct 1777 CTTTGCCTTCAATCTTGGTCTGGATGCGTTCCATCTTGTAGCGATAGAAGGCATCGCTGA 1836 Query 34616 CATTGCGGTTAACGTTCAC 34634 ||| |||| ||| || || Sbjct 1837 CATCGCGGCGAACATTGAC 1855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412837147116305