Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq736 170 3e-36
seq804 168 1e-35
seq162 122 1e-21
seq247 116 6e-20
seq396 111 2e-18
seq294 98.7 2e-14
seq691 87.8 3e-11
>seq736
Length=134049
Score = 170 bits (188), Expect = 3e-36
Identities = 339/504 (67%), Gaps = 21/504 (4%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| || || || |||| ||| ||||| || |||||||| | || |||||||||
Sbjct 46973 CTGGTCGACGTATCGGGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAATGCCGTTGGA 46914
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||||||||| || | ||||| ||| | ||| || | ||| || | ||
Sbjct 46913 GGTGCCGTTGGTGCCGGCGATGTAGGAGCCAGTGGCACGGATGCGGTGGACGTTCAGACC 46854
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|||||| || ||| |||||| || | || ||| | ||||| || || ||||| |||||
Sbjct 46853 GATGCCACCAGCCATCTTGGAAATCATGGCACACGTCTTCAGGGTGTCATAGATACCCTC 46794
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| |||| |||||||||||| ||| ||||| || || || | ||| |||||
Sbjct 46793 AATGCTGTCGTCCTTCATGTCCACCAGGAAGCATGAGGACAGCTGGGCTTGCGGGGTGCC 46734
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
||||||||||| || || | || ||| | ||| ||||||| | ||| ||
Sbjct 46733 AGCATTGAAGAGGGTAGGGGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTGGTATGT 46674
Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899
|||| || ||| | | ||||| || || ||| | ||| ||
Sbjct 46673 CTCGAGGACACGCTCAATGTCGTCT---------------CCCCAGATGCCAACGGCCAC 46629
Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGA---CGGCGTCGCGCACCTTGGTCAGGTA 2073956
||||| ||||||| || || |||||||| | | ||||| | ||| |||||
Sbjct 46628 TCGCATAATCATGTGTTGTGGCCGCTCGACAATCTTGCCGTCG---AGCTTCAGAAGGTA 46572
Query 2073957 GGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCGGAT 2074016
|| || ||| ||| | ||||||||| |||| | ||| || |||| | |||
Sbjct 46571 TGATCGCTCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGACGAT 46512
Query 2074017 GGCGGCGTCGAGGGCCTCCTTGTG 2074040
||||| |||||| ||||||||||
Sbjct 46511 GGCGGAGTCGAGCTCCTCCTTGTG 46488
>seq804
Length=175399
Score = 168 bits (186), Expect = 1e-35
Identities = 237/331 (72%), Gaps = 9/331 (3%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| ||| ||| | |||||| |||| |||||||||||||| || |||||
Sbjct 35165 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACCTCGCTT 35224
Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456
||||||||| || |||| || || || || ||| ||||| |||||||| |||||
Sbjct 35225 CTTGAGCCAGAAAATGGAGGCAAAGGCACCGCT---GAAGAAGATACCCTCGACAGCGGC 35281
Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516
|||| | ||||| |||| |||||| | | | || | | |||||| |||||
Sbjct 35282 AAAGGCAACGAGACGCTGGGCAAAGGA---CGAGTTCTTGTCCTGGATCCATCGAATCGC 35338
Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 794576
||| || ||||| || | | | || | || || |||||| ||||||| ||
Sbjct 35339 CCAGTCAGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAGTTGCG 35398
Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636
|| | | ||||||| || ||||||||||| || ||||| ||||| |||||||||||
Sbjct 35399 CTGGCTGTGCTCCTTGATATAAGTGTCGATGAGCAGGGAGTACGTCTCGGAGTGGATGTT 35458
Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667
|| || |||||||||||| |||||||||
Sbjct 35459 CTCCATCATGATCTGGAAGCCGTAAAAGCAG 35489
Score = 127 bits (140), Expect = 3e-23
Identities = 178/250 (71%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || ||| | |||||| ||| || |||||||||||||| | |
Sbjct 34843 TGACACCGGCCTTCTGGTAGTCGGCGACGCGCTTCTCAAAGAAGTTGGTCTTGCCGCCCA 34902
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| || || |||||| | || ||||||| || | ||| ||||||| ||||
Sbjct 34903 GGGAAATGTTCTCCATAAAGTCAAAGGGGTTGGACGACTTGTACACCTTCTCGTTGCCGA 34962
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | ||||||||||||||||| || ||||||||||| ||||||| || |||||
Sbjct 34963 GAGCTACCAGCAGGCGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTTGGAGTTCA 35022
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
|||| | || || ||||| | ||| | | |||||| | |||||| |||||| |
Sbjct 35023 TGCCCAGCAGGGCGCAAGGCAGAGCTTCGGTCAAAAACTCCTGCTCGATGCGGACGGCGT 35082
Query 794131 CGATGATGAT 794140
|| |||||||
Sbjct 35083 CGGTGATGAT 35092
Score = 122 bits (134), Expect = 1e-21
Identities = 158/216 (73%), Gaps = 3/216 (1%)
Strand=Plus/Plus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
|||||||| | |||||||| ||||||| || |||||||||| || ||||||
Sbjct 35493 GCCTCGGGGATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCG 35552
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG- 796268
|| ||||||||| ||||| |||| ||| ||| |||| |||||| ||| | ||
Sbjct 35553 TCCGAGGCGGCGAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGG 35612
Query 796269 CGA--GACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326
|| | ||||| | | ||| | ||||| | ||||||||||||||| |||||
Sbjct 35613 CGGTTGTTCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAGGAA 35672
Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGG 796362
|||||||||||||||||||| | ||| ||| |||||
Sbjct 35673 GCCTCGGCCTTTTTGTACATTTGCCAGATCTGTTGG 35708
>seq162
Length=159780
Score = 122 bits (134), Expect = 1e-21
Identities = 302/456 (66%), Gaps = 2/456 (0%)
Strand=Plus/Minus
Query 118618 TCTTGCGCACGCCGCGCATGCACACGCACATGTGGAGGCCCTCGAGCACGACGCCGACGC 118677
|||| |||| |||||||| || ||||| |||| | ||| | ||||| |||| |
Sbjct 55316 TCTTCTGCACACCGCGCATCACCATGCACAGGTGGCTGGACTCTATGACGACAGCGACTC 55257
Query 118678 CGCGCGCGCCCGTGACCTCGCTGATGCTCTCGGCGATCTGGCGCGTGAGCGCCTCCTGCA 118737
| | | | | ||| ||| ||| | |||||| | || || ||| || |
Sbjct 55256 CCTGGGGCCGCAGGACGTCGAAGATTGCGTTGGCGATTTCCTTGGTAAGGCGCTCTTGAA 55197
Query 118738 CCTGGAAGCGGTCCGAGAGCATGTCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCC 118797
||| | |||| |||| ||||||| |||||||||| | |||| | ||||||||
Sbjct 55196 TCTGTAGGCGGCGGGAGAACATGTCGGCGATGCGCGGCAGCTTGGAGATGCCGATGACGG 55137
Query 118798 TGCCCGCGGGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGCAGCAGATGGTGCTCGC 118857
| ||| | |||||| | |||| |||||||| | ||||||| ||| ||||||||||
Sbjct 55136 CGTTGTTGGGGATGTAGCCGATGTGCACCTTGCCGGTGAAGGGCACCAGGTGGTGCTCGC 55077
Query 118858 ACATGGAGAAAAAGTCAATGTCGCGCACGGTCACCATCTC-GCCCGACGTCTCGGCAAAG 118916
| | |||||| | ||| |||| ||| |||||||| | | | ||| ||||
Sbjct 55076 AGAGGGAGAAGATGTCGATGTTCTTGACGACAACCATCTCAGAGTGGCC-CTCCTGAAAG 55018
Query 118917 AGGGCGTCGCCGACGGCCTCGGCCAGGGTCAGGCGGTGGCCGCGCGTGCGCTCCACCATG 118976
| |||| || |||| ||| | | || | || ||| ||||| || ||||
Sbjct 55017 ATGGCGCCGTTGACGATGTCGAAGACGTTCTGCTCGTAGCCCTGCGTGAAGGTCATCATG 54958
Query 118977 GCCTTGGCCACGCGCATGGGCGTGTCCAAGAGGCCCTCGCGCGCCACGTCCTCGCCCAGA 119036
|||||||| |||| ||||||| |||| |||||||| || || ||||||||||
Sbjct 54957 GCCTTGGCATAGCGCTCGGGCGTGGCCAACAGGCCCTCTCGGGCAGGATCCTCGCCCACG 54898
Query 119037 CAGACCAGCATGGTCCTCGTGGCGTCGGCCATGCGC 119072
|| | |||| ||| | |||| | |||||||
Sbjct 54897 CACTCGAGCAGCGTCTTGACGGCGCCCTTCATGCGC 54862
>seq247
Length=67129
Score = 116 bits (128), Expect = 6e-20
Identities = 91/109 (83%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| |||| | ||| || ||||||||||| || ||| | || ||||||||||||||||||
Sbjct 37590 GCCTCCAATTTCCTGGATATCAAGCCCCTTCTTGATGTTGGCTGCAAGACCGTGGCCAAC 37649
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
| |||||||| ||||| |||||||| || |||||||| || |||||||
Sbjct 37650 ATGATCAAGGGTAAGTCTCCCGAGGAGATTCGCAAGACTTTCAACATCA 37698
>seq396
Length=75936
Score = 111 bits (122), Expect = 2e-18
Identities = 124/163 (76%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| |||||||||||| ||||||| || || |||
Sbjct 53211 GTACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCCGGCAG 53270
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
|||||| || |||| ||||||||||| |||| ||| ||| |||||| || |
Sbjct 53271 GATCAGTCGGACGGATGTCTGGATCTCTCGGGAAGAGATTGTGGACTTCTTGTT-GTAGG 53329
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632
| ||||| | ||||||||| | | ||| |||| |||||
Sbjct 53330 CGGCCAGCTTGGAAGCCTCGGTGGCAACGCGCTCGAAGATGTC 53372
>seq294
Length=36417
Score = 98.7 bits (108), Expect = 2e-14
Identities = 319/478 (67%), Gaps = 22/478 (5%)
Strand=Plus/Plus
Query 2175026 GGTGTGTGGCTGCGCGGCGGTGCGCACGGCATCGAGCGCCGTTGCC-ACGCTGCCGTCGG 2175084
|||| |||| |||||| | || | |||||||| || | ||| | |||||||||||
Sbjct 22416 GGTGCTTGGC--CGCGGCAGCGCCAATGGCATCGATGGC-GACGCCGAGGCTGCCGTCGG 22472
Query 2175085 TGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGTGCACCTGGC 2175144
| ||||| || || || || || || | ||| | || || | || ||||||| ||||
Sbjct 22473 TTCCGTTCTTGAAGCCCACGGGGAAGGACAGGCCGGAAGCGAGCTCACGGTGCAGCTGGG 22532
Query 2175145 TCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCA--AATAGGGCGC 2175202
|||||| || |||||||| | |||||| | | | ||| || | || ||| |
Sbjct 22533 ACTCGGTCGTTCGCGCGCCAATGGCGCCGACGGAGATGCAGTCGGCGAGGAACTGGGGGG 22592
Query 2175203 CACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGACGACCAGGTCG-C 2175261
| | | ||| | |||| || | |||| |||| | || | | |||||| |
Sbjct 22593 AG--ATGGTGTCGAGCATCTCGGTGGCAATGGGCATGCCGTTG--GAGGTC-AGGTCGAC 22647
Query 2175262 GCAGCAGTCGACGCGATGTGGCG-AGGCCGGCGGCCAGGCGGCACGACCCGTCGAGGTCG 2175320
| || || || || || | || ||||| | | || | ||| ||||| |||
Sbjct 22648 GAAG-AGCCGGCGGGA-GACACGCAGGCCCTTGTTGATCTGGAAGGACGAGTCGATATCG 22705
Query 2175321 GGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGC 2175380
|| ||| || |||||||||||| |||||||||||||| ||||| || | |||||||||
Sbjct 22706 GGATCGTTGATCAGGCCCTTCCAGCCGACGGTCGTGCGAGGCTTCTCCAGGTAGGCGCGC 22765
Query 2175381 ATGACCACCAGGAGAGCGTCGCCGACCTCTGTCTCGGCAAAGGTGCGCA--GCCGTCGGC 2175438
|| || | ||| ||||| ||| || |||||| | || ||| | || | |||
Sbjct 22766 ATCACGATGCAGAGGTCGTCGGCGAGCT---TCTCGG-AGAGCTGCTTAAGGCGGGCGG- 22820
Query 2175439 CATACTCGACGATGGCCTGGGGATCGTGCGCCGAACACGGACCGACGACCACCAAGAG 2175496
| |||||| | ||| | ||| ||||| || || || |||||||| || || ||
Sbjct 22821 CGTACTCGTGGGCGGCTTCGGGGTCGTGGATGGAGCAGGGGCCGACGACGACTAATAG 22878
>seq691
Length=50580
Score = 87.8 bits (96), Expect = 3e-11
Identities = 201/301 (67%), Gaps = 4/301 (1%)
Strand=Plus/Plus
Query 2019141 GGCGTGGACGTCGTGCGTAGAATCATCAAG--CATCACGCTTCGAAAAGAATCGACCTGC 2019198
||| | ||||| || |||| ||||||| | || ||| ||| | | || | |||
Sbjct 13796 GGCATTGACGTTGTTCGTAACCGCATCAAGGGCTTCGCGCA--GAAGAAAGTCACCTTGC 13853
Query 2019199 CGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCC 2019258
| ||||| | |||||| | ||||||| || || ||||| || | || || | ||||
Sbjct 13854 CTCCCGGTAGGCACAAGCTCGTCATCCTTGACGAAGCCGATAGCATGACCTCTGGTGCCC 13913
Query 2019259 AGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCT 2019318
||||||| || || || ||||||| ||| |||| || || || ||||| | || |
Sbjct 13914 AGCAGGCTCTGCGGAGAACGATGGAAATCTACTCCAATACCACTCGATTTGCATTCGCTT 13973
Query 2019319 GCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTG 2019378
||||| ||| | | ||||||| | || ||| || ||||| ||| | || | |
Sbjct 13974 GCAACCAGTCCAACAAGATCATCGAGCCGCTGCAGTCACGATGCGCAATCCTTCGATACG 14033
Query 2019379 CGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGG 2019438
| | || |||| || ||| ||| |||| |||||||||| || |||||||
Sbjct 14034 CCAAGTTGACGGACGAACAAGTCGTGAAGCGGCTGCTGCAGATTATCGAGGCGGAAAAGG 14093
Query 2019439 T 2019439
|
Sbjct 14094 T 14094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916152258513515
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