Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq510 105 3e-17 >seq510 Length=17648 Score = 105 bits (116), Expect = 3e-17 Identities = 124/163 (76%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||||| ||||||||||| |||||||| | |||||||||| ||||| Sbjct 13665 CTCAATCAAGTGAGCGATTGTCATACGAGACGGAATGGCGTGGGGGTTGATGATGATGTC 13724 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATAT-CTTCTTCAGGTACAATCAAACCAA 309802 || | ||||| | ||| |||| ||||| | || || | |||| | | | ||||| Sbjct 13725 GGGCGTAATTCC-CTCTCTGG--TGAACGGCATGTCCTCCTGCCGGTA-AGTGACACCAA 13780 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| |||||||| |||| | || ||||||||||||||||| Sbjct 13781 TAGTGCCCTTTTGTCCGTGACGAGACGCAAACTTGTCACCAAT 13823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951952266440280