Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq373 95.1 3e-14
>seq373
Length=44988
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || || || || || ||||| ||| ||||||||||| |||||
Sbjct 36604 CAGATCTTTGTTAAGACACTGACGGGTAAGACGATTACTCTGGAAGTGGAATCATCTGAT 36663
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || || || || || ||| ||| ||
Sbjct 36664 ACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCAGCAG 36723
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| | ||||| || || |||||| ||||||| || | || ||| ||| |||||| ||
Sbjct 36724 CGCTTGATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGTACCTTGAGCGACTACAACATC 36783
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||| ||| ||||| ||||| |||
Sbjct 36784 CAGAAGGAGAGCACTCTGCACCTGGTT 36810
Score = 89.7 bits (98), Expect = 1e-12
Identities = 133/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||||||||| || ||||| |||| || || |||||
Sbjct 36376 CAGATTTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTGGAGGTCGAGTCATCTGAT 36435
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || || || ||| |||||| ||
Sbjct 36436 ACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAGCAG 36495
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || || ||||| || |||||| ||||||| || | |||||| ||| |||||| ||
Sbjct 36496 CGCCTGATTTTCGCTGGTAAGCAGCTGGAAGACGGCCGCACTTTGAGCGACTACAACATC 36555
Query 206353 CAGAAAGAG 206361
||||| |||
Sbjct 36556 CAGAAGGAG 36564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181807399260085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |