Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq371 172 6e-38
>seq371
Length=49181
Score = 172 bits (190), Expect = 6e-38
Identities = 472/731 (65%), Gaps = 64/731 (9%)
Strand=Plus/Plus
Query 146787 CATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATC 146846
|||||| || || ||| |||| ||| |||| || | ||| || || || | | |
Sbjct 9181 CATGGGAATCGACTTGTGGGGGTCGTATCCCTTGACGATAAAGTCCTCGACCTTCCAGCC 9240
Query 146847 GTCTATGTCCTCCACCCG----CCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTTCC 146902
||| ||| | || ||| || | ||||| |||| |||||| || || || | |
Sbjct 9241 GTCGATG-CTGCCGCCCTTTTCCCGCGCAATCTCCAGCTCGGGGAACGGCCGCGGCTCGC 9299
Query 146903 TGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGG 146962
| ||||| | | ||||| ||| | ||||| || ||||||||||||||| |||| |
Sbjct 9300 GCTCGAGCTGTGTCTGCAGGGCCTCGATGTGGTCGATGTAGACGTGCGCGTCTCCCATGA 9359
Query 146963 TGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCG 147022
||| | | ||||||| || || ||||||||| | ||||| ||||||||||
Sbjct 9360 CGTGGGTGAGGCTCCCCGGCACCAGATCGCACACGTGGGCGAGCATGTGCGTGAGCAGCG 9419
Query 147023 AGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCT 147082
|||||| || ||||||||||||| || || |||||||| | |||| |||||||||||
Sbjct 9420 CGTAGCTCGCAATGTTGAAGGGGATGCCGAGCCCCATGTCGCAGGACCGCTGGTACAGCT 9479
Query 147083 GGCA------------------------------CGAGAGCTCC---CCGTCG--GCC-- 147105
|||| |||| ||||| ||||| |||
Sbjct 9480 GGCAGTGGAGGTGACCCTTTGGCTTGTTCTCCTCCGAGGGCTCCGGGGCGTCGACGCCGC 9539
Query 147106 --------------------ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCA 147145
||||| |||||| | |||||||| ||||| || ||||
Sbjct 9540 GGCCGCGGCCCGGGTACGAGACGTAGAACTGGGCGAACATGTGGCAGGGCGGGAGGGCCA 9599
Query 147146 TGGCGGGCAGGTC-CGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTC 147204
| | ||| ||| |||||||| || || | || ||||||| | ||||||
Sbjct 9600 TTTTCTTAAAGTCGCGC-GGGTTCCACGCGCTGAGTATCATCCGCCTGTCATACGGGTTC 9658
Query 147205 CTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC 147264
| | || | || | | ||||||||| ||||||| ||| |||||| ||
Sbjct 9659 GTGCGCAGCTTGTGGACGATCTCGGCCAGCTGGTCGACGCCCTTGCCGGCGTAGTCGGTG 9718
Query 147265 CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGG 147324
| ||| |||||| ||| |||||||||| ||||||||||||||| || || ||||||
Sbjct 9719 TTGGCGTCGACGTACTCGGCGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGG 9778
Query 147325 TCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCG 147384
|||||| | | ||||| | ||| | | | ||| |||||| |||| |||| | ||
Sbjct 9779 TCGCCGACGTCGCGGTGCGCCAGGCCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCG 9838
Query 147385 TCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAAC 147444
|||||||| || || | || ||| |||| || ||| |||| |||||||
Sbjct 9839 TCCCAGATCTTGACGCCGACGTCGCTGAGGGCCTTGGATGAGGTGTTGCCCTCGATGAAC 9898
Query 147445 CAGAGCAGCTC 147455
||||| |||||
Sbjct 9899 CAGAGGAGCTC 9909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583481545164000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |