Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq371 172 6e-38 >seq371 Length=49181 Score = 172 bits (190), Expect = 6e-38 Identities = 472/731 (65%), Gaps = 64/731 (9%) Strand=Plus/Plus Query 146787 CATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATC 146846 |||||| || || ||| |||| ||| |||| || | ||| || || || | | | Sbjct 9181 CATGGGAATCGACTTGTGGGGGTCGTATCCCTTGACGATAAAGTCCTCGACCTTCCAGCC 9240 Query 146847 GTCTATGTCCTCCACCCG----CCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTTCC 146902 ||| ||| | || ||| || | ||||| |||| |||||| || || || | | Sbjct 9241 GTCGATG-CTGCCGCCCTTTTCCCGCGCAATCTCCAGCTCGGGGAACGGCCGCGGCTCGC 9299 Query 146903 TGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGG 146962 | ||||| | | ||||| ||| | ||||| || ||||||||||||||| |||| | Sbjct 9300 GCTCGAGCTGTGTCTGCAGGGCCTCGATGTGGTCGATGTAGACGTGCGCGTCTCCCATGA 9359 Query 146963 TGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCG 147022 ||| | | ||||||| || || ||||||||| | ||||| |||||||||| Sbjct 9360 CGTGGGTGAGGCTCCCCGGCACCAGATCGCACACGTGGGCGAGCATGTGCGTGAGCAGCG 9419 Query 147023 AGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCT 147082 |||||| || ||||||||||||| || || |||||||| | |||| ||||||||||| Sbjct 9420 CGTAGCTCGCAATGTTGAAGGGGATGCCGAGCCCCATGTCGCAGGACCGCTGGTACAGCT 9479 Query 147083 GGCA------------------------------CGAGAGCTCC---CCGTCG--GCC-- 147105 |||| |||| ||||| ||||| ||| Sbjct 9480 GGCAGTGGAGGTGACCCTTTGGCTTGTTCTCCTCCGAGGGCTCCGGGGCGTCGACGCCGC 9539 Query 147106 --------------------ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCA 147145 ||||| |||||| | |||||||| ||||| || |||| Sbjct 9540 GGCCGCGGCCCGGGTACGAGACGTAGAACTGGGCGAACATGTGGCAGGGCGGGAGGGCCA 9599 Query 147146 TGGCGGGCAGGTC-CGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTC 147204 | | ||| ||| |||||||| || || | || ||||||| | |||||| Sbjct 9600 TTTTCTTAAAGTCGCGC-GGGTTCCACGCGCTGAGTATCATCCGCCTGTCATACGGGTTC 9658 Query 147205 CTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC 147264 | | || | || | | ||||||||| ||||||| ||| |||||| || Sbjct 9659 GTGCGCAGCTTGTGGACGATCTCGGCCAGCTGGTCGACGCCCTTGCCGGCGTAGTCGGTG 9718 Query 147265 CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGG 147324 | ||| |||||| ||| |||||||||| ||||||||||||||| || || |||||| Sbjct 9719 TTGGCGTCGACGTACTCGGCGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGG 9778 Query 147325 TCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCG 147384 |||||| | | ||||| | ||| | | | ||| |||||| |||| |||| | || Sbjct 9779 TCGCCGACGTCGCGGTGCGCCAGGCCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCG 9838 Query 147385 TCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAAC 147444 |||||||| || || | || ||| |||| || ||| |||| ||||||| Sbjct 9839 TCCCAGATCTTGACGCCGACGTCGCTGAGGGCCTTGGATGAGGTGTTGCCCTCGATGAAC 9898 Query 147445 CAGAGCAGCTC 147455 ||||| ||||| Sbjct 9899 CAGAGGAGCTC 9909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583481545164000