Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq373 134 1e-26
seq764 123 2e-23
seq877 120 3e-22
>seq373
Length=44988
Score = 134 bits (148), Expect = 1e-26
Identities = 150/198 (76%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| || |||||||| ||| |||||| || |||| ||||||||||||||
Sbjct 36797 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTTCCAGCTGCTTACCA 36738
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
||||| ||||| ||||||||||| | || | | |||||||||| ||||| |||
Sbjct 36737 GCAAAGATCAAGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTCGACTTG 36678
Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718
| |||| | | || || |||||||| |||| || ||||| |||||||||| ||
Sbjct 36677 A-CGTTGTCGATGGTATCAGATGATTCCACTTCCAGAGTAATCGTCTTACCCGTCAGTGT 36619
Query 35719 TTTCACAAATATCTGCAT 35736
|| ||||| ||||||||
Sbjct 36618 CTTAACAAAGATCTGCAT 36601
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | |||||| |||| || |||||||| || |||||
Sbjct 36050 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCAAA 35991
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||||| ||| | | |||||||||| |||||| ||||| | |
Sbjct 35990 GATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTCACATT 35931
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| ||| || ||||| | ||||| || || || || | || || ||
Sbjct 35930 GTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 35871
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 35870 GAAGATCTGCAT 35859
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||| || | || |||||||| || |||||||| ||| |
Sbjct 36599 CCACCACGAAGACGGAGGACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 36540
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || |||| |||||||||||||| || || |||| ||||||||||||| ||||
Sbjct 36539 AAAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 36480
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||||||| ||||| ||| | |||| | | || || || || ||
Sbjct 36479 ATACCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCAATAGTATCAGATGACTCGAC 36421
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| ||||| || || || || | || || || || ||||||||
Sbjct 36420 CTCCAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAAATCTGCAT 36373
Score = 98.7 bits (108), Expect = 9e-16
Identities = 126/171 (74%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | |||||| |||| || |||||||| || |||||
Sbjct 36336 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCAAA 36277
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||||| ||| | | |||||||||| |||||| ||| | ||
Sbjct 36276 GATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 36218
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
|| | | ||||| || || ||||| | |||||||| || || ||||
Sbjct 36217 TGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATCGTCTTGCCGGTCA 36167
>seq764
Length=87966
Score = 123 bits (136), Expect = 2e-23
Identities = 136/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| |||| || |||||| | || || ||||||||||| || || |
Sbjct 48336 CCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 48395
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
|||| ||||||||||||| |||| || |||||||||| |||||| ||| | | |
Sbjct 48396 TCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 48455
Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726
| | ||||||| || || ||||| | ||||| || || ||||||| || ||||| |
Sbjct 48456 CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 48515
Query 35727 A 35727
|
Sbjct 48516 A 48516
>seq877
Length=50207
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || |||| || | || |||||||| || |||||||| ||| |
Sbjct 31700 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 31641
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | || || |||||||| || ||||| |||| ||||||||||||| ||
Sbjct 31640 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 31581
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| || |||||||||| ||||| ||| | |||| | | |||||| || |||||
Sbjct 31580 ATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCAC 31522
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | |||||||| || ||||| | || || || || ||||||||
Sbjct 31521 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 31474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450788613095800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |