Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq736 107 6e-18 >seq736 Length=134049 Score = 107 bits (118), Expect = 6e-18 Identities = 209/303 (69%), Gaps = 18/303 (6%) Strand=Plus/Plus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 ||||||||| || ||| | || || ||||||||| || || |||||||| || || || Sbjct 46919 CGGCATTATCCCCATGCTGCGAGTCTTCAACAACACTGCCCGATACGTCGACCAGGGTGG 46978 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC--ATTGAA 255088 | ||| || || || || || |||||||||| ||||| |||||||||||| || | Sbjct 46979 CAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTTGA 47038 Query 255089 CGGTTTTTACTGCTGTCCGACAAGA---CCGGCACCGAGGAGCTGATCGCCCGCGACATC 255145 | || || | |||| ||||| ||||| |||||| | |||||||||| | Sbjct 47039 C----TTCCTTGATCTCCG-CAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGCGACTTG 47093 Query 255146 TACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGA----GAC 255201 | | ||| | ||| | |||||| || || || ||||| ||||| || | Sbjct 47094 TTCCTTGCTCTGTGGATCCCCGATCTCTTCAT--GAAGCGTG--TCGAGAAGAACTTGGA 47149 Query 255202 CTGGAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTT 255261 ||||| |||||||| |||||| || || ||||| | |||| | || || ||||| Sbjct 47150 CTGGACGCTCATGTGCCCCAACGAATGCCCTGGTCTTGCTGACTGCTACGGCGAGGAGTT 47209 Query 255262 TGA 255264 ||| Sbjct 47210 TGA 47212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588317989758825