Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq736 107 6e-18
>seq736
Length=134049
Score = 107 bits (118), Expect = 6e-18
Identities = 209/303 (69%), Gaps = 18/303 (6%)
Strand=Plus/Plus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
||||||||| || ||| | || || ||||||||| || || |||||||| || || ||
Sbjct 46919 CGGCATTATCCCCATGCTGCGAGTCTTCAACAACACTGCCCGATACGTCGACCAGGGTGG 46978
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC--ATTGAA 255088
| ||| || || || || || |||||||||| ||||| |||||||||||| || |
Sbjct 46979 CAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTTGA 47038
Query 255089 CGGTTTTTACTGCTGTCCGACAAGA---CCGGCACCGAGGAGCTGATCGCCCGCGACATC 255145
| || || | |||| ||||| ||||| |||||| | |||||||||| |
Sbjct 47039 C----TTCCTTGATCTCCG-CAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGCGACTTG 47093
Query 255146 TACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGA----GAC 255201
| | ||| | ||| | |||||| || || || ||||| ||||| || |
Sbjct 47094 TTCCTTGCTCTGTGGATCCCCGATCTCTTCAT--GAAGCGTG--TCGAGAAGAACTTGGA 47149
Query 255202 CTGGAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTT 255261
||||| |||||||| |||||| || || ||||| | |||| | || || |||||
Sbjct 47150 CTGGACGCTCATGTGCCCCAACGAATGCCCTGGTCTTGCTGACTGCTACGGCGAGGAGTT 47209
Query 255262 TGA 255264
|||
Sbjct 47210 TGA 47212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588317989758825
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |