Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq804 125 9e-24
seq710 87.8 2e-12
>seq804
Length=175399
Score = 125 bits (138), Expect = 9e-24
Identities = 125/162 (77%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074
|||||| ||| ||| |||||||||||||| |||||||| || || || ||| ||| ||
Sbjct 35147 GGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCC 35206
Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134
||||||||||| |||||||| | ||||||||| | ||| | || |||||||||
Sbjct 35207 GGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGAT 35266
Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176
||||| ||| || || |||| |||||||| ||||||||
Sbjct 35267 ACCCTCGACAGCGGCAAAGGCAACGAGACGCTGGGCAAAGGA 35308
>seq710
Length=40501
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 14236 ACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTC 14295
||||| |||||| ||||| || ||||| | ||| || || ||| | ||| | | |
Sbjct 23830 ACCGATGGCGTCGATTTCGTCAATGAAGATGATGCAGGGCGCATTCTTTCGGCCTTCCGC 23889
Query 14296 AAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGC 14355
|| | |||||||| | | || || || ||||||||||||||||| | | |
Sbjct 23890 GAACAAGTCTCGCACACGAGAAGGGCCCACGCCAACAAACATCTCCACAAACTCAGAACC 23949
Query 14356 G-GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 14414
| || | || |||||| ||| ||| || || || |||| |||||| || ||||
Sbjct 23950 GCTCACGCT-GAAGAAGGGCACGCCAGACTCTCCGGCAGTGGCCTTGGCGAGAAGCGTCT 24008
Query 14415 TCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466
| || || ||||| || ||||||| |||||| || |||||| |||||||
Sbjct 24009 TTCCTGTTCCTGGAGGGCCGGCGAGAATGGCACCGCGAGGGATCTTGGCACC 24060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618428358560600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |