Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq736 275 7e-69
seq804 143 3e-29
seq710 98.7 1e-15
>seq736
Length=134049
Score = 275 bits (304), Expect = 7e-69
Identities = 935/1435 (65%), Gaps = 35/1435 (2%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
||||| ||||| | ||||| |||||| | || || || || |||||||| ||||
Sbjct 46608 CCACAACACATGATTATGCGAGTGGCCGTTGGCATCTGGGGAGACGACATTGAGCGTGTC 46667
Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339
| ||||||||| || |||||| |||| | | ||| ||||| | || |||||||
Sbjct 46668 CTCGAGACATACCACCTCATGTCCAGCAAGTTCT--TCACCCACGCCTCCCCTACCCTCT 46725
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||||||||| || || | |||| ||||| |||||||| | | || ||||| |
Sbjct 46726 TCAATGCTGGCACCCCGCAAGCCCAGCTGTCCTCATGCTTCCTGGTGGACATGAAGGACG 46785
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| || | |||||||||| || || | | |||||| || || ||| |||||
Sbjct 46786 ACAGCATTGAGGGTATCTATGACACCCTGAAGACGTGTGCCATGATTTCCAAGATGGCTG 46845
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 104517
| || || || || || |||| | | |||| | ||| || ||| || ||
Sbjct 46846 GTGGCATCGGTCTGAACGTCCACCGCATCCGTGCCACTGG--CTCCTACATCGCCGGCAC 46903
Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577
|| || || | || ||||| || ||||| || || || ||| ||| || || ||
Sbjct 46904 CAACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAACACTGCCCGATA 46963
Query 104578 TGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631
|| | || | ||| ||||| || | | || |||| || ||||| ||
Sbjct 46964 CGTCGACCAGGGTGGCAACAAGCGTCCT---GGTGCCTTTGCCATCTACCTCGAGCCCTG 47020
Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691
|||||| || || | || |||||||| | || ||||| || | ||||||| ||
Sbjct 47021 GCACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAGAACCACGGCAAGGAGGAGGTTCG 47080
Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751
|||||| | ||| ||||| ||||| || ||||||||||||||| | || ||| |
Sbjct 47081 CGCCCGCGACTTGTTCCTTGCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAA 47140
Query 104752 GA--GTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGT 104808
|| ||| | ||| | ||| | || || || || || |||||||| | || |
Sbjct 47141 GAACTTGG--ACTGGACGCTCATGTGCCCCAACGAATGC-CCTGGTCTTGCTGACTGCTA 47197
Query 104809 GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC 104868
|| ||||||||||| || || ||| |||||||||| || || || | | |||
Sbjct 47198 CGGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGGGAGGGACGTGGTCGTAAGAC 47257
Query 104869 GGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927
| | ||| | || | ||||| | | || || || | || ||||||||||||| |
Sbjct 47258 CATCCGTGCT-CAGAAGCTGTGGTACTCCATCCTGGAGGCCCAGACCGAGACTGGTAACC 47316
Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987
| | |||||||||||| ||| ||| |||| ||||| || || ||||| ||||| |
Sbjct 47317 CCTTCATGCTTTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACTTGGGCACCA 47376
Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047
|| || || || ||||| || || ||| | || | | | || ||| ||||
Sbjct 47377 TCCGCAGCTCTAACCTCTGCACTGAGATCATTGAGTACTGTGCCCCCGACGAGGTCGCTG 47436
Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATT 105105
| || ||| | || || | || || ||| | ||| || | | | || | | | |
Sbjct 47437 TCTGCAACTTGGCCTCTCTGGCCCTTCCCGCCTTTGTCGA-CTACA-ACGAGGGCTGCTA 47494
Query 105106 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTAT 105165
|| | | || || |||||||| || || ||| | ||||| ||| | | ||
Sbjct 47495 CGACTTCAAGAAGCTTCACGAAGTCACCAAGGTGGTCGTCCGCAACCTCAACCGCATCAT 47554
Query 105166 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 105225
||| || |||||||| ||| ||||| || || ||| | ||||| || ||
Sbjct 47555 CGATGTGAACCACTACCCCGTCGAGGAGGCTCGCAACAGCAACATGCGCCACCGACCTAT 47614
Query 105226 TGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATT 105284
||| ||||||| |||||||| || || | ||| | || || || | | ||||| |
Sbjct 47615 CGGTGTCGGTGTCCAGGGTCTTGCTGACGCGTTCCTCGCTCTG-CGTCTGCCCTTTGAGT 47673
Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344
| ||| || || | || || || || |||||||| || || ||||| ||||
Sbjct 47674 CTCCCGAGGCTCGCGAGCTGAACAAGCAGATCTTCGAGACCATTTACCATGCCGCCCTTG 47733
Query 105345 AGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402
| || | || ||| | || |||| || || || |||||| | || |||| || ||
Sbjct 47734 AAGC--TTCCATGGAGATTGCCAAGGTCGAGGGCCCCTATGAATCGTTCAAGGGATCGCC 47791
Query 105403 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGA 105462
|| || | || | || || | || |||||||| | || || | | ||
Sbjct 47792 TGCATCTGAGGGTATCCTCCAGTACGACATGTGGGACGTCAAGCCCTCCGACCTGTGGGA 47851
Query 105463 CTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522
||||| | |||||||| | ||||||||| | ||| | || ||||| | ||| | ||
Sbjct 47852 GTGGGACTCCCTCAAGGAGCAGATCAAGGAGCACGGTGTCCGCAACAGCTTGCTCGTCGC 47911
Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582
||| ||||| || ||| ||| | || || |||| || || |||||||| || |||||
Sbjct 47912 TCCTATGCCCACTGCCAGTACCTCTCAGATTCTGGGCAACAACGAATGCTTCGAGCCCTA 47971
Query 105583 CACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637
||| | |||||||| | | || | ||| || || ||||| | ||||||||
Sbjct 47972 CACCTCCAACATCTACCAGCGACGTGTCCTTGCTGGTGAGTTCCAGGTTGTCAAC 48026
>seq804
Length=175399
Score = 143 bits (158), Expect = 3e-29
Identities = 179/243 (74%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773
||||| | ||||| | || |||| || |||| ||||| || || ||||| ||
Sbjct 35389 CTCTTCAACGCCATTGAGACCATTCCTTGCATTCGCAAGAAGGCTGACTGGGCGATTCGA 35330
Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832
||| | | |||| | ||| ||||||| |||| ||| | || ||||| ||| ||
Sbjct 35329 TGGATCCAGGACAAGAACTCGT-CCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCTGTCGA 35271
Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892
||||||||||||| ||| |||| | | |||| |||||||||||||||||||||||
Sbjct 35270 GGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATTTTCTGGCTCAAGAAGCGAGGTCTCAT 35211
Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 94952
||| || || ||| ||||||||||| ||||||||||||||||| || ||| || ||
Sbjct 35210 GCCCGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTT 35151
Query 94953 TGC 94955
|||
Sbjct 35150 TGC 35148
>seq710
Length=40501
Score = 98.7 bits (108), Expect = 1e-15
Identities = 183/263 (70%), Gaps = 8/263 (3%)
Strand=Plus/Plus
Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762
||| || || || |||||||||| |||||| || ||| | || | | | || |
Sbjct 23836 GGCGTCGATTTCGTCAATGAAGATGATGCAGGGCGCATTCTTTCGGCCTTCCGCGAACAA 23895
Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAAC 9821
|| || ||||| | |||||| |||||||||||||||||||| | | || ||
Sbjct 23896 GTCTCGCACACGAGAAGGGCCCACGCCAACAAACATCTCCACAAACTCAGAACCGCTCAC 23955
Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881
| || |||||| || ||| || || ||| |||| ||||||||| ||||| || |
Sbjct 23956 GCT-GAAGAAGGGCACGCCAGACTCTCCGGCAGTGGCCTTGGCGAGAAGCGTCTTTCCTG 24014
Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 9938
| ||||| || ||||| | |||||| || || |||||||| || |||| |||| |
Sbjct 24015 TTCCTGGAGGGCCGGCGAGAATGGCACCGCGAGGGATCTTGGCACCCAGCTTCTCAAACT 24074
Query 9939 ATCTCTCAGGTTGCTTAAGAAAA 9961
|||| |||||||| || |||
Sbjct 24075 ---TCTCGGGTTGCTTCAGGAAA 24094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583254347677400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |