Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq736 255 6e-63
seq146 104 3e-17
>seq736
Length=134049
Score = 255 bits (282), Expect = 6e-63
Identities = 414/591 (70%), Gaps = 6/591 (1%)
Strand=Plus/Plus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254
||||| || ||| | || ||| || |||||| |||||||| ||||| ||| ||
Sbjct 46623 ATGCGAGTGGCCGTTGGCATCTGGGGAGACGACATTGAGCGTGTCCTCGAGACATACCAC 46682
Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314
| ||| | |||| ||| || |||||| | || ||||| ||||| ||||| ||
Sbjct 46683 CTCATGTCCAGCAAGTTCTTCACCCACGCCTCCCCTACCCTCTTCAATGCTGGCACCCCG 46742
Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374
|| | ||| |||| ||||||||||||| |||||||| ||| || || || |||
Sbjct 46743 CAAGCCCAGCTGTCCTCATGCTTCCTGGTGGACATGAAGGACGACAGCATTGAGGGTATC 46802
Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434
|| || || || ||| ||||||| || |||||| | | ||||| |||||| | ||
Sbjct 46803 TATGACACCCTGAAGACGTGTGCCATGATTTCCAAGATGGCTGGTGGCATCGGTCTGAAC 46862
Query 53435 TGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492
|| | || ||||||| | ||| | ||| || || |||||| | || | |
Sbjct 46863 G--TCCACCGCATCCGTGCCACTGGCTCCTACATCGCCGGCACCAACGGCACCTCCAACG 46920
Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552
| || | || ||||| || |||||||||||||| ||||| |||||| ||||||||||
Sbjct 46921 GCATTATCCCCATGCTGCGAGTCTTCAACAACACTGCCCGATACGTCGACCAGGGTGGCA 46980
Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612
||||| || | || ||||||||||||||||| |||||||||||| | | || |
Sbjct 46981 ACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTTGACT 47040
Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAG 53672
| || || || || ||| || || | || ||| | ||| ||| ||| |||| |
Sbjct 47041 TCCTTGATCTCCGCAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGCGACTTGTTCCTTG 47100
Query 53673 CTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGA 53732
|||||||||| || || ||||||||| | || |||||| || ||| ||| || |
Sbjct 47101 CTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACTTGGACTGGACGCTCA 47160
Query 53733 TGTGCCCGAACGAGTGCCCCGG-CCTCCAGGGTGTCTACGGTGAGGAGTTT 53782
||||||| ||||| ||||| || | | | | || |||||| |||||||||
Sbjct 47161 TGTGCCCCAACGAATGCCCTGGTCTTGCTGACTG-CTACGGCGAGGAGTTT 47210
Score = 123 bits (136), Expect = 3e-23
Identities = 303/452 (67%), Gaps = 17/452 (4%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||| | ||||||| || || ||||| || || || ||||||| ||||||||
Sbjct 47892 CGCAACAGCTTGCTCGTCGCTCCTATGCCCACTGCCAGTACCTCTCAGATTCTGGGCAAC 47951
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
||||| |||||||| ||||| |||||||||||| ||| || ||| || ||||||
Sbjct 47952 AACGAATGCTTCGAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTTGCTGGTGAG 48011
Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACC-C 55662
|| | ||||| || ||||||||||| | | | | |||| |
Sbjct 48012 TTCCAGGTTGTCAACCCTTGGCTTCTCAAGGACCTGGTCGACACCGGCCTGTGGTCTGAC 48071
Query 55663 GCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAA---TCTGGAGAT 55716
|| || |||| || || |||| |||||| ||| ||||||| || | ||
Sbjct 48072 GCC-ATGAAGAACCGCATCATTGCCGAGAACGGC---TCCATCCAGAACATTCCCAACAT 48127
Query 55717 TCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGAT 55776
|| | |||||| | ||| ||| || |||||||| | ||| ||| ||
Sbjct 48128 CCCCGAGGACATCAAGGCCCTGTACAAGACCGTCTGGGAGATATCTCAGC---GTCAAAT 48184
Query 55777 TGAC---ATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTT 55833
| | ||| |||||||||||||| | |||||||||||||||||| || ||||||
Sbjct 48185 CGTCCAGATGGCGGCTGATCGTGGTGCTTTCATCGACCAGTCCCAGTCCCTAAACATCCA 48244
Query 55834 CATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGG 55893
|||| || | || | ||| |||| | | | |||||||| ||| |||||| ||
Sbjct 48245 CATGAAGGACCCCACGATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGCTCGG 48304
Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGACCC 55925
|||||||| || |||||||| || || ||||
Sbjct 48305 TCTCAAGACCGGCATGTACTACCTCCGTACCC 48336
>seq146
Length=52672
Score = 104 bits (114), Expect = 3e-17
Identities = 269/404 (67%), Gaps = 6/404 (1%)
Strand=Plus/Minus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
|| || ||||| || || || || |||| |||| ||| |||| |||||||| || | |
Sbjct 27730 CCCGTGCCGATACCGTCGGCGCCATTGATGAGAACCATGGGCAGGATAGGGGCATACACC 27671
Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTC-AGCCGG 151994
|| ||||| | ||| | || || || | | || |||| || || ||| ||| |
Sbjct 27670 TCGGGCTCAATCTGCTTTCCATCCTCGAACTGGTGCTTCAGGTTGGGATCGTCGAGC--G 27613
Query 151995 ATCGAATATCCGTCGAGT-CATA-GGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCC 152052
| |||| | | | | || | || || || || ||| |||| || | ||||||
Sbjct 27612 A-CGAAAAGATGGAGCGGGCAAACGGGGACAGGCGGGTAAAGGTGTAACGAGGGCTGGCG 27554
Query 152053 GCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGG 152112
|| || |||||| || || || | ||||| | || |||||| || | ||||| |
Sbjct 27553 GCGTCGGAGCCACCGGCAAGTCGAGAACCAAAGTTACCGCTGGGCTCCAGCACGTTGATG 27494
Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172
||||| | ||||| || | ||||||| | || || ||||||| ||||||
Sbjct 27493 TTGTTCGATCCCACAAAGTCTTGAGCCAGGCCAATGATGGTCTGCTGCAGAGAGGCTTCA 27434
Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232
|||||||| || || ||| | | | || ||| || |||| || | | ||||| ||||
Sbjct 27433 CCGTGGTGGTAGGCAGTCAGTCCGGAGACGTAACCAGCCAGCTCCACAACCTTTTCGTCC 27374
Query 152233 GTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTG 152276
| || ||| ||||| ||| ||||| | |||||| |||||
Sbjct 27373 TTGACCACGTTTCGCTTGAAACATGCGTACAGCACCTTTCGCTG 27330
Score = 96.9 bits (106), Expect = 4e-15
Identities = 223/331 (67%), Gaps = 4/331 (1%)
Strand=Plus/Minus
Query 118013 AGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTAC 118072
|| ||||||||||| |||||| ||||| ||||| ||||||||||||| |||||||
Sbjct 26821 AGACCCTTGATATGACTACCGTCATGATCCTGATCGGCCATGATCATCAGGTGGCCGTAG 26762
Query 118073 CGTAAATCTC-TCAGGGAGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAAG 118131
|| || ||| || | | || |||| || | ||| || |||| || || |
Sbjct 26761 CG-AAGGCTCTTCGTGTCCGTGTACACCTGCTTGTGCTTGAGACCCAGGAACTGCTTGAT 26703
Query 118132 GTTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCGG 118191
||| || || | ||||| || | || | |||| ||||| || |||||| || |
Sbjct 26702 GTTCTGAATCTCTTGATTTTTTGTGATTTGGTCGATGGATGCGTCTCGCACGTTGAGCAG 26643
Query 118192 CTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCA-CAACGCTCAAGCCGGCAA 118250
|||||| || |||||||| || || | |||| || ||| | |||| || | |
Sbjct 26642 CTTACCACGGAGTGGAAAGACACCGATTCGGTCAGGGTCCAGGATGGCTC-GTCCAGACA 26584
Query 118251 TAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCGGTGCTGCGAT 118310
|| || | || || |||||||| ||||| | || || ||||||||| || |||
Sbjct 26583 CGGCCAGACCTTTGGCGGAGTCACCTTCGGTCAGGATGAGGGTGCACTCGTGGCCGCGCC 26524
Query 118311 GAGTACCGGCCCAATTAGCATCATCCAGCTT 118341
| || || ||| || || || |||||||
Sbjct 26523 GGGTGCCTGCCAGGTTGGCCTCGACCAGCTT 26493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547209946423000
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