Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq736 342 6e-89
seq373 176 5e-39
seq877 152 6e-32
seq764 131 2e-25
seq804 109 6e-19
>seq736
Length=134049
Score = 342 bits (378), Expect = 6e-89
Identities = 1156/1771 (65%), Gaps = 77/1771 (4%)
Strand=Plus/Minus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || || || ||||||||||| |||||||| || |||||||||| | ||||
Sbjct 48340 GCCTGGGTACGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCGGTGAAGTGC 48281
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| ||| ||| | | ||||||| || |||| |||||| || ||||| |||||
Sbjct 48280 ATGCTGGTGATCTTGCCCATCGTGGGGTCCTTCATGTGGATGTTTAGGGACTGGGACTGG 48221
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATT-GACTTTTGTGGAATTTCCCA 80210
||||||||| |||||||| |||||||| | | ||| ||| | | | || |||||
Sbjct 48220 TCGATGAAAGCACCACGATCAGCCGCCATCTGGACGATTTGACGCT-GAGATATCTCCCA 48162
Query 80211 TACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTGCC 80267
|| || |||| |||| || | ||||| || |||| || | | | ||
Sbjct 48161 GACGGTCTTGTACAGGGCCTT--GATG-TCCTCGGGGATGTTGGGAATGTTCTGGATGGA 48105
Query 80268 ACCGTCCTTTACAATTTGATTT--TTCAATTCA-GACGTCCAGACACCAAGCTTGTG--- 80321
|||| || |||| ||| ||| |||| | |||| |||| || || |||
Sbjct 48104 GCCGTTCTCGGCAAT--GATGCGGTTC--TTCATGGCGTC-AGACCACAGGCCGGTGTCG 48050
Query 80322 --CAGATCTTTCACAAGGT---GCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGA 80376
||| || || | ||| | ||| || | || |||| || || ||| ||
Sbjct 48049 ACCAGGTCCTTGAGAAGCCAAGGGTTGACAACCTGGA---ACTCACCAGCAAGGACACGT 47993
Query 80377 CGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCC 80436
||| | || | ||| | ||||| ||||| || |||||||| || || |||||||
Sbjct 47992 CGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGAATCTGAGAG 47933
Query 80437 GTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATA 80496
|| || || || ||||| || |||| | || || || | ||||||| ||||||
Sbjct 47932 GTACTGGCAGTGGGCATAGGAGCGACGAGCAAGCTGTTGCGGACACCGTGCTCCTTGATC 47873
Query 80497 TCCTC---GCGCAAATCTGAC---CAAAAATCAACCCCAACGCTGTGAC--CCCACATGT 80548
| ||| | | | || || || | || | ||| |||| |||||||||
Sbjct 47872 TGCTCCTTGAGGGAGTCCCACTCCCACAGGTCGG----AGGGCT-TGACGTCCCACATGT 47818
Query 80549 CGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCG 80608
||| ||| | ||| ||||| || || || || ||| ||||| || || ||||||||
Sbjct 47817 CGTACTGGAGGATACCCTCAGATGCAGGCGATCCCTTGAACGATTCATAGGGGCCCTCGA 47758
Query 80609 TCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCT 80668
|||||| | ||| || | |||||| || || |||||| ||| |||| ||
Sbjct 47757 CCTTGGCAATCTCCATGGAAGCTTCAAGGGCGGCATGGTAAATGGTCTCGAAGATCTGCT 47698
Query 80669 TGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAG 80728
|||||| |||| |||| || || || | || | || | |||| ||||||
Sbjct 47697 TGTTCAGCTCGCGAGCCTCGGGAGACTCAAAGGGCAGACGCAGAGCGAGGAACGCGTCAG 47638
Query 80729 CCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCC 80787
| || ||||| || |||| |||| || ||||||||| |||| | | || ||||||
Sbjct 47637 CAAGACCCTGGACACCGACACCGATAGGTCGGTGGCGCATGTT-GCTGTTGCGAGCCTCC 47579
Query 80788 GGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTA 80847
| ||||| ||| |||||||| |||||| |||||||| || ||| ||
Sbjct 47578 TCGACGGGGTAGTGGTTCACATCGATGATGCGGTTGAGGTTGCGGACGACCACCTTGGTG 47519
Query 80848 ACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTC------ACAAATGCCGGAAGG 80901
|| || ||||| |||| |||||| | | | | || ||||| || ||||||
Sbjct 47518 ACTTCGTGAAGCTTCTTGAAGTCGTAGCAGCCCTCGTTGTAGTCGACAAAGGCGGGAAGG 47459
Query 80902 CTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAG---CATCTGTAAACTCGACGATT 80958
||| || |||| ||||| || || ||||| || | || | ||| ||| | |||
Sbjct 47458 GCCAGAGAGGCCAAGTTGCAGACAGCGACCTCGTCGGGGGCA-CAGTA--CTCAATGATC 47402
Query 80959 TCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTG 81018
|| ||||| | ||||| || || |||| ||| |||||||| |||| ||||
Sbjct 47401 TCAGTGCAGAGGTTAGAGCTGCGGATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTG 47342
Query 81019 CAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCG 81078
|| ||||||||| |||| | ||| |||| |||||| ||| | || ||||||| |
Sbjct 47341 CAGTGGTCCTTGTAAAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCCAGGATGGAG 47282
Query 81079 TCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCG 81138
| ||| | || | || || ||| || || || | | ||||| ||
Sbjct 47281 TACCACAGCTTCTGAGCACGGATGGTCTTACGACCACGTCCCTCCCTCTCGTACTTTTCG 47222
Query 81139 TAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCA 81197
|| | || |||| | |||| | ||| ||| || | ||||| ||||| |||||
Sbjct 47221 TACAGAGCCTCAAACTCCTCGCCGTAGCAGT-CAGCAAGACCAGGGCATTCGTTGGGGCA 47163
Query 81198 CATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAG 81257
||| || |||||| || ||||| ||| ||||||||| || |||||||| ||
Sbjct 47162 CATGAGCGTCCAGTCCAAGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCACAG 47103
Query 81258 GGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAG 81317
|| ||||| ||||||| ||| ||||||| | || ||||| ||| | || ||
Sbjct 47102 AGCAAGGAACAAGTCGCGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGATCAAG 47043
Query 81318 AAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG 81377
||||| | || ||| || ||||| ||||| || || | ||| | | || ||||
Sbjct 47042 GAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAG---GACG 46986
Query 81378 ------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGAT 81431
||||||||||| |||||| |||||||| ||| || || |||| ||| |||||
Sbjct 46985 CTTGTTGCCACCCTGGTCGACGTATCGGGCAGTGTTGTTGAAGACTCGCAGCATGGGGAT 46926
Query 81432 GATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCT 81491
|| || | || ||||| || || |||| || || |||| || | |||
Sbjct 46925 AATGCCGTTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCCAGTGGCACGGA---TGCG 46869
Query 81492 GATTGAA----AGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGG 81547
| | || |||||||||||||| | | ||| |||||| |||||| |||| ||
Sbjct 46868 G-TGGACGTTCAGACCGATGCCACCAGCCATCTTGGAAATCATGGCACACGTCTTCAGGG 46810
Query 81548 TCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCT 81607
| ||||| || ||||| ||||| || | |||||||| | || ||| || |||| ||
Sbjct 46809 TGTCATAGATACCCTCAATGCTGTCGTCCTTCATGTCCACCAGGAAGCATGAGGACAGCT 46750
Query 81608 GAGGGCTT--TTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTT 81665
|||||| | ||| |||||||| || || |||| ||||| |||| | | |
Sbjct 46749 --GGGCTTGCGGGGTGCCAGCATTGAAGAGGGTAGGGGAGGCGTGGGTGAAGAACTTGCT 46692
Query 81666 TGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGC 81725
||||| |||| || || || ||| || ||| ||||| || || || | ||
Sbjct 46691 GGACATGAGGTGGTATGTCTCGAGGACACGCTCAATGTCGTCTCCCCAGATGCCAACGGC 46632
Query 81726 TACACGCATAAACATGTACTGGGGCGTCTCG 81756
|| ||||||| ||||| || ||| ||||
Sbjct 46631 CACTCGCATAATCATGTGTTGTGGCCGCTCG 46601
>seq373
Length=44988
Score = 176 bits (194), Expect = 5e-39
Identities = 168/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
|||||||| || ||||||||||| || ||||| ||||||||||| ||| | ||| |
Sbjct 36157 GTCAAGACCCTGACCGGCAAGACGATCACTCTCGAGGTTGAGTCCTCTGACACCATCGAC 36216
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
|| | ||| | || || |||||||||||||| || ||||| |||||||||||||| ||
Sbjct 36217 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGTCTCATC 36276
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|||||||| ||||| || ||||| | || ||||| | ||||| || |||| |||||
Sbjct 36277 TTTGCTGGCAAGCAGCTTGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAG 36336
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| || || || || ||| | ||||||||||||||
Sbjct 36337 TCTACACTCCACCTTGTCCTCCGTCTTCGCGGTGG 36371
Score = 172 bits (190), Expect = 6e-38
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| ||||| |||||||| || ||||||||||| || || || ||||| |||||
Sbjct 35856 ATCATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCG 35915
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | ||| | ||| ||||| | || || |||||||||||||| || ||||| |||
Sbjct 35916 TCCGACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGAC 35975
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
||||||||||| || |||||||| ||||| || ||||| | || ||||| | |||||
Sbjct 35976 CAGCAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGCCGAACCCTCTCCGACTAC 36035
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||| ||||| || || || || || || | || ||||| |||||
Sbjct 36036 AACATCCAGAAGGAGTCTACCCTCCACCTGGTTCTCCGCCTTCGTGGTGG 36085
Score = 161 bits (178), Expect = 1e-34
Identities = 176/231 (76%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || || ||||| |||||||| || || || ||| |
Sbjct 36601 ATGCAGATCTTTGTTAAGACACTGACGGGTAAGACGATTACTCTGGAAGTGGAATCATCT 36660
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| | || ||||||||||||||||| || || || ||||||
Sbjct 36661 GATACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCAG 36720
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| | || |||||||||||||| || || || | ||||||| | ||| ||||| ||
Sbjct 36721 CAGCGCTTGATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGTACCTTGAGC-GACTACAA 36779
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| |||||| || || || | ||||| || ||||| ||
Sbjct 36780 CATCCAGAAGGAGAGCACTCTGCACCTGGTTCTCCGTCTCCGTGGTGGCCA 36830
Score = 156 bits (172), Expect = 5e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || || || ||||| || || || ||||| |||||| |
Sbjct 36373 ATGCAGATTTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTGGAGGTCGAGTCATCT 36432
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || | ||| | || ||||||||||||||||| |||||||| ||||||
Sbjct 36433 GATACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAG 36492
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| || ||||| ||||||||||| || || || | || || | ||| ||||| ||
Sbjct 36493 CAGCGCCTGATTTTCGCTGGTAAGCAGCTGGAAGACGGCCGCACTTTGAGC-GACTACAA 36551
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||| || || | ||| | |||||||| |||||
Sbjct 36552 CATCCAGAAGGAGAGCACCCTGCACTTGGTCCTCCGTCTTCGTGGTGG 36599
>seq877
Length=50207
Score = 152 bits (168), Expect = 6e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || || || ||||| || || |||||||| |||||
Sbjct 31474 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 31533
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | || ||||||||||||||||| || || || ||||||
Sbjct 31534 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 31593
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| || || ||||| || ||||| |||||||||| || ||||| ||| ||||| ||
Sbjct 31594 CAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAA 31652
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||| || || || ||| |||| || || |||||
Sbjct 31653 CATCCAGAAGGAGAGCACCCTCCACCTGGTCCTGCGCCTGCGTGGTGG 31700
>seq764
Length=87966
Score = 131 bits (144), Expect = 2e-25
Identities = 138/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| || ||||| || || |||||||| || || |||||||| ||||| || | ||
Sbjct 48517 CTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACGAT 48458
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| ||| | ||| | || || |||||||||||||| ||||| || ||||||||||| |
Sbjct 48457 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGATT 48398
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| || ||||||||||| |||||||||| || ||||| | ||||| || |||| ||
Sbjct 48397 GATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACATCCAGAA 48338
Query 27594 GG 27595
||
Sbjct 48337 GG 48336
>seq804
Length=175399
Score = 109 bits (120), Expect = 6e-19
Identities = 148/206 (72%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGATGAATCGTGGG---TCGTCGTTTGGTCAGCGT 64719
|| |||||||| ||||| || || ||||| | | ||||| |||| ||||||
Sbjct 35353 AAGAAGGCTGACTGGGCGATTCGATGGATCCAGGACAAGAACTCGTCCTTTGCCCAGCGT 35294
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|||| || |||||| ||| || || || ||||| || | || || ||||||
Sbjct 35293 CTCGTTGCCTTTGCCGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATTTTC 35234
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||||| || ||||| || || ||||| || ||| | ||||| |||||||| ||||||||
Sbjct 35233 TGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCTCGT 35174
Query 64840 GACGAGGGGCTCCACCAAGAATTTGC 64865
|||||||| || ||| || |||||
Sbjct 35173 GACGAGGGTCTGCACACGGACTTTGC 35148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570304090941200
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