Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq371 114 1e-20
>seq371
Length=49181
Score = 114 bits (126), Expect = 1e-20
Identities = 157/213 (74%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 6500 AGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTC 6559
|||| ||||||||| || ||||| || | ||||| || | || |||||||||||
Sbjct 9275 AGCTCGGGGAACGGCCGCGGCTCGCGCTCGAGCTGTGTCTGCAGGGCCTCGATGTGGTCG 9334
Query 6560 AGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCA-ACCCCACG 6616
| ||||| ||||| || |||| |||| | ||||||| || |||| | | |||
Sbjct 9335 ATGTAGACGTGCGCGTCTCCCATGACGTGGGTGAG-GCTCCCC-GGCACCAGATCGCAC- 9391
Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676
|| || |||| ||||| ||||||||| ||||| || ||||||||||| || | || | |
Sbjct 9392 ACGTGGGCGAGCATGTGCGTGAGCAGCGCGTAGCTCGCAATGTTGAAGGGGATGCCGAGC 9451
Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709
|||||||| | || || || || |||||||||
Sbjct 9452 CCCATGTCGCAGGACCGCTGGTACAGCTGGCAG 9484
Score = 114 bits (126), Expect = 1e-20
Identities = 157/213 (74%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
||||||||| || || || || | ||||||||| | || | || ||||||||||| ||
Sbjct 9484 CTGCCAGCTGTACCAGCGGTCCTGCGACATGGGGCTCGGCATCCCCTTCAACATTGCGAG 9425
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGT-TGGTTCCTGGGGAGCTGG 34754
||||| ||||||||| ||||| |||| || || ||| | | |||| || |||||||
Sbjct 9424 CTACGCGCTGCTCACGCACATGCTCGCCCACGT-GTGCGATCTGGTGCC-GGGGAGC-CT 9368
Query 34755 TGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCA 34812
| |||| |||| || ||||| ||||| | ||||||||||| || | || ||
Sbjct 9367 CACCCACGTCATGGGAGACGCGCACGTCTACATCGACCACATCGAGGCCCTGCAGACACA 9308
Query 34813 GCTGCAACGAGAGCCCCGACCGTTCCCCCAGCT 34845
||| | || ||||| || ||||||||| ||||
Sbjct 9307 GCTCGAGCGCGAGCCGCGGCCGTTCCCCGAGCT 9275
Score = 91.5 bits (100), Expect = 1e-13
Identities = 207/305 (68%), Gaps = 10/305 (3%)
Strand=Plus/Plus
Query 6724 CGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTT 6783
|| ||||||||| ||| || ||||||| || ||||| ||||| | ||
Sbjct 9556 CGAGACGTAGAACTGGGCGAACATGTGGCAGGGCGGGAGGGCCATTTTCTTAAAGTCGCG 9615
Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTC---CGCTTCAAGGTGTC 6840
|||||||||||||| | | |||| ||||||| |||||| ||| | | | |
Sbjct 9616 CGGGTTCCACGCGCTGAGTATCATCCGCCTGTCATACGGGTTCGTGCGCAGCTTGTGGAC 9675
Query 6841 GATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGC-TTCGCTCCCCCGAT 6899
|||| || | |||||||| | |||| || | ||||| | || || | || |
Sbjct 9676 GATCTCGGCC---AGCTGGTCGACGCCCTTGCCGGCGTAGTCGGTGTTGGCGTCGACG-T 9731
Query 6900 ACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCC 6959
|||| || |||||||| | ||||||||| |||||||| ||||||| |||||| | || |
Sbjct 9732 ACTCGGCGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGC 9791
Query 6960 GAGATGGGAACCCC-CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | | || |||| ||| || || || || || |||| |||||||||||||
Sbjct 9792 GGTGCGCCAGGCCGACGCT-GTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTG 9850
Query 7019 ACCCC 7023
|| ||
Sbjct 9851 ACGCC 9855
Score = 91.5 bits (100), Expect = 1e-13
Identities = 207/305 (68%), Gaps = 10/305 (3%)
Strand=Plus/Minus
Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTCCC 34380
|| || ||||||||||||| |||| || || || || || ||| |||| || | |
Sbjct 9855 GGCGTCAAGATCTGGGACGGCAACGGCTCCCGCGAGTTCCTCGAC-AGCGTCGGCCTGGC 9797
Query 34381 ATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440
|| || | |||||| ||||||| |||||||| ||||||||| | |||||||| ||
Sbjct 9796 GCACCGCGACGTCGGCGACCTGGGCCCCGTCTACGGCTTCCAGTGGCGGCACTTTGGCGC 9737
Query 34441 GGAGTATCGGGGGAGCGAA-GCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACG 34499
||||| || | || || | ||||| | || |||| | |||||||| | ||
Sbjct 9736 CGAGTA-CGTCGACGCCAACACCGACTACGCCGGCAAGGGCGTCGACCAGCT---GGCCG 9681
Query 34500 TGATCGACACCTTGAAGCG---GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGA 34556
||||| | | | ||| |||||| ||||||| |||| | | |||||||||
Sbjct 9680 AGATCGTCCACAAGCTGCGCACGAACCCGTATGACAGGCGGATGATACTCAGCGCGTGGA 9621
Query 34557 ACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACG 34616
||||| || | ||||| ||||| || ||||||| || ||| |||||||
Sbjct 9620 ACCCGCGCGACTTTAAGAAAATGGCCCTCCCGCCCTGCCACATGTTCGCCCAGTTCTACG 9561
Query 34617 TCGCG 34621
|| ||
Sbjct 9560 TCTCG 9556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448257441097200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |