Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq373 86.0 4e-12 >seq373 Length=44988 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| | ||| || ||||| || || || ||||| || || || |||| Sbjct 36694 GACAAGGAGGGTATCCCGCCTGACCAGCAGCGCTTGATCTTTGCTGGTAAGCAGCTGGAA 36753 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| || | |||| ||| ||||||||||| || ||||||||| |||| ||||| | Sbjct 36754 GACGGTCGTACCTTGAGCGACTACAACATCCAGAAGGAGAGCACTCTGCACCTGGTTCTC 36813 Query 28003 CGTTTGCGTGGCGGC 28017 ||| | ||||| ||| Sbjct 36814 CGTCTCCGTGGTGGC 36828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355858561690395