Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq373 107 1e-18
seq877 95.1 8e-15
>seq373
Length=44988
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || |||||||| ||||| || ||||| || || || || || |
Sbjct 36373 ATGCAGATTTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTGGAGGTCGAGTCATCT 36432
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| ||| |||| | | || || ||| ||||| || ||| | || || || ||
Sbjct 36433 GATACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAG 36492
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || || || || || |||||||||| |||||||| |||| ||||||
Sbjct 36493 CAGCGCCTGATTTTCGCTGGTAAGCAGCTGGAAGACGGCCGCACTTTGAGCGACTACAAC 36552
Query 23791 ATACAAAAAGAG 23802
|| || || |||
Sbjct 36553 ATCCAGAAGGAG 36564
Score = 87.8 bits (96), Expect = 1e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680
|||| || ||||| || || || |||||||||||||| ||||| ||| | ||||| | |
Sbjct 36155 TCGTCAAGACCCTGACCGGCAAGACGATCACTCTCGAGGTTGAGTCCTCTGACACCATCG 36214
Query 23681 AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740
| | | || || || ||||| || ||| | || || || || |||||| | |
Sbjct 36215 ACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGTCTCA 36274
Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800
| ||||| ||||| || || || |||| || || | ||| |||||||| || || |
Sbjct 36275 TCTTTGCTGGCAAGCAGCTTGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGG 36334
Query 23801 AGTCCACA 23808
|||| |||
Sbjct 36335 AGTCTACA 36342
>seq877
Length=50207
Score = 95.1 bits (104), Expect = 8e-15
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| || ||||||||||| || |||||||| || || || || ||
Sbjct 31471 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 31530
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | || | | || || ||| ||||| || || | || || ||
Sbjct 31531 TCCGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGAC 31590
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||||| | || ||||||||||| || || || || | ||||| | |||| |||
Sbjct 31591 CAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 31650
Query 23788 AACATACAAAAAGAG 23802
||||| || || |||
Sbjct 31651 AACATCCAGAAGGAG 31665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338005954249580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |