Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq373 143 6e-29
seq1 134 3e-26
seq764 129 1e-24
seq877 122 2e-22
>seq373
Length=44988
Score = 143 bits (158), Expect = 6e-29
Identities = 151/199 (76%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | |||||||||||||| || || || || |||| ||||| |||| | |||
Sbjct 36365 CGAAGACGGAGGACAAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTT 36306
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || |||||||| ||||| ||||| || || || ||||| || || |||||
Sbjct 36305 CGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCC 36246
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| ||| || ||||||||||| |||| || || || |
Sbjct 36245 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGA 36186
Query 225673 GTGATCGTCTTGCCCGTCA 225691
|||||||||||||| ||||
Sbjct 36185 GTGATCGTCTTGCCGGTCA 36167
Score = 134 bits (148), Expect = 3e-26
Identities = 163/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || |||||||| || || || || |||| ||||| |||| | ||
Sbjct 36080 ACGAAGGCGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 36021
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| || || || |||||||| ||||| ||||| || || || ||||| || || |||||
Sbjct 36020 TCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACC 35961
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||||||| ||||||||||| || | || || || |
Sbjct 35960 CTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCGAG 35901
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||||||| || | || || | ||| | |||||
Sbjct 35900 GGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 35859
>seq1
Length=45472
Score = 134 bits (148), Expect = 3e-26
Identities = 203/283 (72%), Gaps = 7/283 (2%)
Strand=Plus/Minus
Query 7447 TATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGATTATAAG 7505
||||||||||||| ||||| || ||||| ||| || ||||| | | |||||
Sbjct 39148 TATTTAATATTTGCCCTATTTTCAGG-ATTATTAGGAACAGCCTTTTCAGTATTAATAAG 39090
Query 7506 GTTAGAA-TTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACG 7564
|||||| |||| | | ||| | |||| || | || |||| |||| | || |||
Sbjct 39089 ATTAGAACTTAGTGGACCTGGGGT-TCAA---TTTATTGCAAATAACCAATTATATAACA 39034
Query 7565 TTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAG 7624
|||||| || || || ||| || | ||||| |||||| | |||||||| | | ||||
Sbjct 39033 GTATTATAACAGCTCACGCCATTTTAATGATATTCTTTATGGTTATGCCAGCATTAATAG 38974
Query 7625 GCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAA 7684
| || || ||||||| | | ||||||||||| || | ||||||||||| || || |
Sbjct 38973 GAGGATTTGGAAATTTTCTAATGCCTTTAATGATAGGAGGACCTGATATGGCATTCCCTA 38914
Query 7685 GGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATT 7727
| | || ||||| ||||| ||||||||||||||| |||||
Sbjct 38913 GATTAAATAATATTAGTTTCTGATTACTACCGCCTAGTTTATT 38871
>seq764
Length=87966
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| || |||| ||||| || |||||||| |||||||||||
Sbjct 48338 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGATC 48397
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
| ||| || ||||| || ||||| || |||||||| |||||||| ||| ||| |||
Sbjct 48398 AATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 48457
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| ||||| |||| || || || | ||||| ||||||||||||| || || | |||
Sbjct 48458 ATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 48516
>seq877
Length=50207
Score = 122 bits (134), Expect = 2e-22
Identities = 162/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | |||||| |||||||| ||| || || |||| ||||| ||| || ||
Sbjct 31695 ACGCAGGCGCAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGT 31636
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| || || ||||| || || || ||||| || || || ||
Sbjct 31635 GCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCC 31576
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| || ||||| ||| || ||||||||||| || | ||||| || |
Sbjct 31575 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 31516
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||||||||| ||||| | || || | ||| | ||||| ||
Sbjct 31515 GGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 31471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192517677814190
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