Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq371 114 1e-20 >seq371 Length=49181 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 29611 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTA 29670 ||| || || | ||||| | ||||||||| || ||| | || | |||||| | ||| Sbjct 9280 GGGGAACGGCCGCGGCTCGCGCTCGAGCTGTGTCTGCAGGGCCTCGATGTGGTCGATGTA 9339 Query 29671 GACGTGAGCATCTCCCAGGGTGTGGACAAA-CTCTCCCGGTTCTAGCCCGGTGACGTGAG 29729 |||||| || ||||||| | |||| | ||| ||||| | || || ||||| | Sbjct 9340 GACGTGCGCGTCTCCCATGACGTGGGTGAGGCTC-CCCGGCACCAGATCGCACACGTGGG 9398 Query 29730 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGT 29789 | | ||||| |||||| || | |||||| || ||||| ||||| | ||||||||||||| Sbjct 9399 CGAGCATGTGCGTGAGCAGCGCGTAGCTCGCAATGTTGAAGGGGATGCCGAGCCCCATGT 9458 Query 29790 CCCCTGACCTCTGGTAGAGCTGGCA 29814 | | |||| |||||| |||||||| Sbjct 9459 CGCAGGACCGCTGGTACAGCTGGCA 9483 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||| ||||||||| ||||| || || |||||||| || | || | |||| | | | Sbjct 9743 AAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGCGCCAGG 9802 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCT 30134 || |||| | || || | ||| |||||| ||||||||||||| || || | || Sbjct 9803 CCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCGACGTCG 9862 Query 30135 CGGAGAGCTCTTTG--GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGAC 30192 | ||| || ||| | ||| | || ||||| || |||||| || ||||| | | ||| Sbjct 9863 CTGAGGGC-CTTGGATGAGGTGTTG--CCCTC-GATGAACCAGAGGAGCTCGGCGATGAC 9918 Query 30193 GGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 ||| ||||| | ||| || ||||||||||| Sbjct 9919 GGCGCGGAGGAAGACGCGCTTCGTGGTGAGGAGGGG 9954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406158819149110