Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq371 114 1e-20
>seq371
Length=49181
Score = 114 bits (126), Expect = 1e-20
Identities = 150/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 29611 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTA 29670
||| || || | ||||| | ||||||||| || ||| | || | |||||| | |||
Sbjct 9280 GGGGAACGGCCGCGGCTCGCGCTCGAGCTGTGTCTGCAGGGCCTCGATGTGGTCGATGTA 9339
Query 29671 GACGTGAGCATCTCCCAGGGTGTGGACAAA-CTCTCCCGGTTCTAGCCCGGTGACGTGAG 29729
|||||| || ||||||| | |||| | ||| ||||| | || || ||||| |
Sbjct 9340 GACGTGCGCGTCTCCCATGACGTGGGTGAGGCTC-CCCGGCACCAGATCGCACACGTGGG 9398
Query 29730 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGT 29789
| | ||||| |||||| || | |||||| || ||||| ||||| | |||||||||||||
Sbjct 9399 CGAGCATGTGCGTGAGCAGCGCGTAGCTCGCAATGTTGAAGGGGATGCCGAGCCCCATGT 9458
Query 29790 CCCCTGACCTCTGGTAGAGCTGGCA 29814
| | |||| |||||| ||||||||
Sbjct 9459 CGCAGGACCGCTGGTACAGCTGGCA 9483
Score = 86.0 bits (94), Expect = 5e-12
Identities = 152/216 (70%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| |||| ||||||||| ||||| || || |||||||| || | || | |||| | | |
Sbjct 9743 AAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGCGCCAGG 9802
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCT 30134
|| |||| | || || | ||| |||||| ||||||||||||| || || | ||
Sbjct 9803 CCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCGACGTCG 9862
Query 30135 CGGAGAGCTCTTTG--GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGAC 30192
| ||| || ||| | ||| | || ||||| || |||||| || ||||| | | |||
Sbjct 9863 CTGAGGGC-CTTGGATGAGGTGTTG--CCCTC-GATGAACCAGAGGAGCTCGGCGATGAC 9918
Query 30193 GGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228
||| ||||| | ||| || |||||||||||
Sbjct 9919 GGCGCGGAGGAAGACGCGCTTCGTGGTGAGGAGGGG 9954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406158819149110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |