Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq804 154 1e-32
>seq804
Length=175399
Score = 154 bits (170), Expect = 1e-32
Identities = 550/849 (65%), Gaps = 23/849 (3%)
Strand=Plus/Plus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|| ||||| |||| || ||||| || ||||| || || ||||| | | ||||| ||
Sbjct 34854 TTCTGGTAGTCGGCGACGCGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAAATGTTC 34913
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376
|||||||| ||||| || || | | ||||| || || |||||||| |||
Sbjct 34914 TCCATAAAGTCAAAGGGGTTGGACGACTTGTACACCTTCTCGTTGCCGAGAGCTACCAGC 34973
Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436
| ||||| || ||||| || || ||||| ||||||| | | |||| || || | |
Sbjct 34974 AGGCGGTCGGCGACAAACTCAATGTACTGCTTCATGAGGTTGGAGTTCATGCCCAGCAGG 35033
Query 4437 -CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495
| || ||| || || | ||||||||||| || || || ||||| || ||||| ||
Sbjct 35034 GCGCA-AGGCAGAGCTTCGGTCAAAAACTCCTGCTCGATGCGGACGGCGTCGGTGATGAT 35092
Query 4496 ATCTTTTATTTTATCTTTAGATGGT----TTATTTAC-TAAGTATCCAAACAATAAACAC 4550
|| || || || | ||| || || | | || | || | ||
Sbjct 35093 GTCACGAATCACCTCCTT-GCTGGCGCGGTTCTTCAGGTGAGAGTGCAGC----AGGCAG 35147
Query 4551 GCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCG 4610
||||| || |||| ||| ||||| | || || ||||| ||||| || | |||
Sbjct 35148 GCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCG 35207
Query 4611 GGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATG 4670
||||| | ||||| ||| || ||||| || || | |||||| | || ||||| ||
Sbjct 35208 GGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATA 35267
Query 4671 CCTTCTACGGCGGCAAACGCTACTAATCG---GGACCCGAACGAGCTGGCTTTGTCTTTA 4727
|| || || |||||||| || || | || || | ||||| | ||||| |
Sbjct 35268 CCCTCGACAGCGGCAAAGGCAACGAGACGCTGGGCAAAGGACGAGTTC---TTGTCCTGG 35324
Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTA 4787
|||||| | ||||||| ||| || || || ||| ||||| || | || |||||
Sbjct 35325 ATCCATCGAATCGCCCAGTCAGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTG 35384
Query 4788 AATAATTTACTTTTTTCAAATGGG-TCTTGAATATAAGTGTCTATTAGTAGGCTATACAT 4846
|| | | | || || | || | ||||||||||| || || ||| ||| |
Sbjct 35385 AAGAGGT-AGTTGCGCTGGCTGTGCTCCTTGATATAAGTGTCGATGAGCAGGGAGTACGT 35443
Query 4847 TTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTAC 4906
|| || || || || || || ||||| || ||||||||||| | ||| || | |
Sbjct 35444 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAAAAGCAGCGAGCCTCGGGGAT 35503
Query 4907 TTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGC 4966
|| || ||| | || | || || | ||| ||||| || || ||||| ||| ||
Sbjct 35504 CTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCGGC 35563
Query 4967 AAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAA---GTTTTTTCCA 5023
|| || |||| | ||||| || ||||||| |||||| || | | || |||||
Sbjct 35564 GAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCA 35623
Query 5024 GTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTT 5083
|| | ||| || || | | |||| || || | ||||| || || || || || ||
Sbjct 35624 GTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTT 35683
Query 5084 TTTGTACAT 5092
|||||||||
Sbjct 35684 TTTGTACAT 35692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427044993869705
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |