Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq736 118 1e-21
>seq736
Length=134049
Score = 118 bits (130), Expect = 1e-21
Identities = 276/411 (67%), Gaps = 4/411 (1%)
Strand=Plus/Minus
Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGT-CACCATCTTCCTTAACTCGTTTCAT 78013
||||||||||| || |||||||| | | ||||| || |||| || || || |||||
Sbjct 47182 CCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAAGTTCTT-CTCGACACGCTTCAT 47124
Query 78014 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCC 78073
|||||||| || ||||| ||||||| || | || |||| | | || || || ||
Sbjct 47123 GAAGAGATCGGGGATCCACAGAGCAAGGAACAAGTCGCGGGCGCGAACCTCCTCCTTGCC 47064
Query 78074 TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 78133
||||| ||||| || || || | | || | ||||| || || || || ||
Sbjct 47063 GTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGAT 47004
Query 78134 TGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATA 78193
|| | | ||||| || || || || ||||| || | |||| ||| ||||| || |
Sbjct 47003 GGCAAAGGCACCAGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCAGTGTTGTTGAA 46944
Query 78194 AACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCC 78253
|||| || ||| || ||||| ||||| || || || || || || | || || ||
Sbjct 46943 GACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCC 46884
Query 78254 ACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGC 78313
| | || || || | | | || || || || |||||||| || || | ||
Sbjct 46883 AGTGGCACGGATGCGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGAAATCATGGC 46824
Query 78314 GCAACGT-TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363
| |||| |||| || || ||||||||||| || ||||| ||| ||||||
Sbjct 46823 AC-ACGTCTTCAGGGTGTCATAGATACCCTCAATGCTGTCGTCCTTCATGT 46774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694661115226400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |