Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq736 118 1e-21 >seq736 Length=134049 Score = 118 bits (130), Expect = 1e-21 Identities = 276/411 (67%), Gaps = 4/411 (1%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGT-CACCATCTTCCTTAACTCGTTTCAT 78013 ||||||||||| || |||||||| | | ||||| || |||| || || || ||||| Sbjct 47182 CCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAAGTTCTT-CTCGACACGCTTCAT 47124 Query 78014 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCC 78073 |||||||| || ||||| ||||||| || | || |||| | | || || || || Sbjct 47123 GAAGAGATCGGGGATCCACAGAGCAAGGAACAAGTCGCGGGCGCGAACCTCCTCCTTGCC 47064 Query 78074 TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 78133 ||||| ||||| || || || | | || | ||||| || || || || || Sbjct 47063 GTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGAT 47004 Query 78134 TGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATA 78193 || | | ||||| || || || || ||||| || | |||| ||| ||||| || | Sbjct 47003 GGCAAAGGCACCAGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCAGTGTTGTTGAA 46944 Query 78194 AACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCC 78253 |||| || ||| || ||||| ||||| || || || || || || | || || || Sbjct 46943 GACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCC 46884 Query 78254 ACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGC 78313 | | || || || | | | || || || || |||||||| || || | || Sbjct 46883 AGTGGCACGGATGCGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGAAATCATGGC 46824 Query 78314 GCAACGT-TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363 | |||| |||| || || ||||||||||| || ||||| ||| |||||| Sbjct 46823 AC-ACGTCTTCAGGGTGTCATAGATACCCTCAATGCTGTCGTCCTTCATGT 46774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694661115226400