Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq736 122 1e-22 >seq736 Length=134049 Score = 122 bits (134), Expect = 1e-22 Identities = 282/420 (67%), Gaps = 4/420 (1%) Strand=Plus/Minus Query 76541 TCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTC-ACCATCTTCCTTAAC 76599 ||| | | |||||| ||||| || || ||||| | | ||| || | ||||| | || Sbjct 47191 TCAGCAAGACCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAAGTTCTTC-TCGAC 47133 Query 76600 CCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTC 76659 || ||||| |||||||| || ||||| ||||||| || | || |||| | | || Sbjct 47132 ACGCTTCATGAAGAGATCGGGGATCCACAGAGCAAGGAACAAGTCGCGGGCGCGAACCTC 47073 Query 76660 TTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTC 76719 || || || ||||| ||||| ||||| || | | || | ||||| || || Sbjct 47072 CTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTC 47013 Query 76720 TAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGT 76779 || || || || | |||| || || || || || ||||| || | |||| |||||| Sbjct 47012 GAGGTAGATGGCAAAGGCACCAGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCAGT 46953 Query 76780 GTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAAT 76839 ||| || | |||| || ||| || ||||||||||| || || || || || || | || Sbjct 46952 GTTGTTGAAGACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCGAT 46893 Query 76840 ATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGA 76899 || ||| ||||| || | || || || || || ||||| || || Sbjct 46892 GTAGGAGCCAGTGGCACGGATGCGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGA 46833 Query 76900 GATTAGAGCACAGCGT-TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGT 76958 || | ||||| ||| |||| ||||||||||| ||||| || || || ||| |||||| Sbjct 46832 AATCATGGCACA-CGTCTTCAGGGTGTCATAGATACCCTCAATGCTGTCGTCCTTCATGT 46774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712926513163200