Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq877 170 2e-37
seq373 143 2e-29
seq764 122 8e-23
>seq877
Length=50207
Score = 170 bits (188), Expect = 2e-37
Identities = 178/231 (77%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| || || |||||||||||||| ||||| ||||||
Sbjct 31700 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 31641
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || ||||||||||||||||| || ||||||||||| ||||||| |||
Sbjct 31640 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 31581
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| | || | | ||| | | | |||||| ||||||||
Sbjct 31580 ATGCCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 31522
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||| | || ||||| || ||||| || ||||| |||||||||||||| ||
Sbjct 31521 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 31471
>seq373
Length=44988
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| ||||| |||||||||||||| ||||| ||||||
Sbjct 36599 CCACCACGAAGACGGAGGACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 36540
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| ||||| |||| || |||||||| || ||||| ||||||||||| ||||||| |||
Sbjct 36539 AAAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 36480
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| | || | | ||| | | | ||| || ||||| ||
Sbjct 36479 ATACCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCAATAGTATCAGATGACTCGAC 36421
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || || || || || || || ||||| ||||||||||||||
Sbjct 36420 CTCCAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAAATCTGCAT 36373
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| || || || ||||||||| ||||| |||||||||
Sbjct 36085 CCACCACGAAGGCGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 36026
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| || ||||||||||| || || || || ||||| ||||||| ||
Sbjct 36025 AGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGG 35966
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| || |||| || | | | |||||| |||||| ||
Sbjct 35965 ATACCCTCCTTGTCCTGGATCTTGGACTTC-ACATTGTCGATGGTGTCGGACGACTCGAC 35907
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||| | || || || || || || || ||||| ||||| |||||||||
Sbjct 35906 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 35858
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | ||||| ||||| |||||||||||||| ||||| ||||||
Sbjct 36828 GCCACCACGGAGACGGAGAACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 36769
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| ||| || |||| || |||||||| || || || |||| |||||| ||||| | ||
Sbjct 36768 CAAGGTACGACCGTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGG 36709
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | |||||||||| ||| | || | | ||| | | | || || || ||||
Sbjct 36708 GATACCCTCCTTGTCC-TGAATCTTCGACTTGACGTTGTCGATGGTATCAGATGATTCCA 36650
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| |||| || ||||| ||||||||||| ||||| || || ||||||||
Sbjct 36649 CTTCCAGAGTAATCGTCTTACCCGTCAGTGTCTTAACAAAGATCTGCAT 36601
Score = 120 bits (132), Expect = 3e-22
Identities = 159/218 (73%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | || || || || || ||||||||| ||||| |||||||||
Sbjct 36371 CCACCGCGAAGACGGAGGACAAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAG 36312
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| || ||||||||||| || || || || ||||| ||||||| ||
Sbjct 36311 AGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGG 36252
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| || ||| ||| | | | ||||| ||||| ||
Sbjct 36251 ATACCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCAGAGGACTCAAC 36193
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
||| | || ||||| || || ||||| ||||| ||||
Sbjct 36192 CTCGAGAGTGATCGTCTTGCCGGTCAGGGTCTTGACGA 36155
>seq764
Length=87966
Score = 122 bits (134), Expect = 8e-23
Identities = 138/183 (75%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||||| ||||| || | || ||||||||||| || ||||| |
Sbjct 48336 CCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 48395
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
||| ||||| ||||||| ||||| || |||||||||| ||| || ||| || |
Sbjct 48396 TCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 48455
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | |||||| ||||| ||||| | || || || || |||||||| ||||| ||
Sbjct 48456 CG--ATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 48513
Query 41851 GAA 41853
|||
Sbjct 48514 GAA 48516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462298885762000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |