Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq535 131 4e-25
>seq535
Length=62126
Score = 131 bits (144), Expect = 4e-25
Identities = 275/405 (68%), Gaps = 4/405 (1%)
Strand=Plus/Minus
Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296
||||||| ||| | ||| |||| | |||||||| || | || |||||| |||
Sbjct 15187 CCATCTTCTGGGTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCAACGAGCTCA 15128
Query 230297 TCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGA 230356
|| ||| || |||||||| || | || | | || || | || | ||| |||
Sbjct 15127 TCTCTCGTGATGAGGGTCTGCACACTGACTTTGCCTGCCTGCTGCACTCTCACCTCAAGA 15068
Query 230357 ACAA-GCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAG 230415
|| || | || |||| | || | ||||| || || || || || || ||
Sbjct 15067 ACCGTGCCAGCAAG-GAGATGATCCGTGACATCATCACCGACGCTGTCCGAATTGAGCAG 15009
Query 230416 GAGTTCATTTGTGACGCTATTCCATGTCGCCTTA-TTGGCATGAACGCTGAACTTATGGG 230474
|||||| | || ||| | || || |||||| ||||||||||| | || |||
Sbjct 15008 GAGTTCTTGACCGAGGCTCTCCCCTG-CGCCTTGCTTGGCATGAACTCCAGCCTGATGAA 14950
Query 230475 ACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTA 230534
|||||||| || || || ||||||||| | | || || || || |||| || || ||
Sbjct 14949 GCAGTACATTGAGTTTGTTGCCGACCGCCTGCTGGTCGCTCTCGGCAACGAAAAGGTCTA 14890
Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594
||| ||| |||||||||| || |||||| |||||| || || |||||||||||
Sbjct 14889 CAAGTCTTCCAACCCCTTTGACTTCATGGAGAACATTTCTCTCGGTGGCAAGACCAACTT 14830
Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639
|||||| ||||| ||| ||||| |||| | ||||||| |||||
Sbjct 14829 CTTCGAGAAGCGCGTCGCCGACTACCAGAAGGCTGGTGTCATGAA 14785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057792081813650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |