Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1458 201 1e-46
>seq1458
Length=45513
Score = 201 bits (222), Expect = 1e-46
Identities = 520/797 (65%), Gaps = 74/797 (9%)
Strand=Plus/Minus
Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596
||||| | ||| | |||||| || | |||||||| ||| |||| | | ||||||||
Sbjct 41349 TAGACGGACATGTTCATGGGAATCGATTTGTGGGGGTCGTATCCCTTGACCACAAAGTCC 41290
Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGG----ATCCTGAGCCTGGGAAA 145652
|| || | || |||| ||| | || ||| ||| | ||| ||| ||| ||
Sbjct 41289 TCGACCTTCCAGCCATCGATG-CTGCCGCCCTTCTCCCGCGTAATCTCCAGCTCGGGGAA 41231
Query 145653 GGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGT 145711
||||| || || | || |||||| || || | || | ||||| || ||||||||
Sbjct 41230 TGGCCGCGGT-TCGCGCTCCAGCTGGGTCTGGAGAGCGTCGATGTGGTCGATGTAGACGT 41172
Query 145712 GCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCA 145771
| ||||| |||| ||||||| ||| | |||||| | || | | ||| |||| ||
Sbjct 41171 GTGCGTCTCCCATGACGTGGGTGAGGCTTCCGGGCACCAGATCACACACGTGAGCGAGCA 41112
Query 145772 TGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCG 145831
||| || ||||| | |||||||| ||||||||||| | || || |||||||| | |
Sbjct 41111 TGTGCGTGAGCAGCGCATAGCTGGCAATGTTGAAGGGGATGCCAAGACCCATGTCGCAGG 41052
Query 145832 AGCGCTGGTACAGCTGGCAGGAGAGCT--CCC---------------------------- 145861
|||||||||| ||||||||| ||| | |||
Sbjct 41051 AGCGCTGGTATAGCTGGCAGTGGAGGTGGCCCTTTGGCTTGTTTTCTTCCGTGGGCTCTG 40992
Query 145862 ---CGCC--CGCCACGT----------------------AGAACTGGCACAGGAGGTGGC 145894
|||| |||| ||| |||||||| | | |||||
Sbjct 40991 CGGCGCCAACGCCCCGTCCGCGTCCAGGGTACGAGACGTAGAACTGGGCAAACATGTGGC 40932
Query 145895 AGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCC 145954
||||||||| ||||||| | ||| ||||||||||||| |||||| | ||||
Sbjct 40931 AGGGCGGCAAGGCCATGCTCTTGAAGTCTCGCGGGTTCCAGGCGCTGAGGATCATTCTCC 40872
Query 145955 TGCTCTCGGGGTTCCTCTTG---ATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCT 146011
| | ||| || ||| | || || | || |||||||| |||||||
Sbjct 40871 GGTCGTAAGGG---CTGTTGCGAAGCTTGTGGATGATCTCGGCCAGCTGGTCGACGCCCT 40815
Query 146012 GCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACC 146071
|| ||| || | ||| | || |||||| |||| || ||||| | ||||||||| |
Sbjct 40814 TGCCGGCGTAGTCGGCCTTTGCATCGACGTACTCGGCGCCAAAGTGTCGCCACTGGAAGC 40755
Query 146072 CGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGT 146131
|||||||||| |||||||| ||| ||| | ||| ||| ||| | | | ||||||| |
Sbjct 40754 CGTAGACGGGGCCCAGGTCGCCGACCTCGCGGTGGGTCAGGCCGACGCTGTCGAGGAACT 40695
Query 146132 CCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTC 146189
| |||||||| ||| ||||||||||||||||||| | ||| ||| | | ||||
Sbjct 40694 CGCGGGACCCATTGCCGTCCCAGATCTTGACGCCGACGTCGTTGAGGG--CGAGGGAGGA 40637
Query 146190 CGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTT 146249
||| ||| |||||||||||| ||||| ||| ||| | | |||||||| ||
Sbjct 40636 TGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCGCGGAGGAAGACCCGTTT 40577
Query 146250 GGTGGTCAGCAGGGGGA 146266
|| || ||||| ||||
Sbjct 40576 TGTTGTGAGCAGCGGGA 40560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590059429614200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |