Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08] 2,355 sequences; 38,137,656 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1458 201 1e-46 >seq1458 Length=45513 Score = 201 bits (222), Expect = 1e-46 Identities = 520/797 (65%), Gaps = 74/797 (9%) Strand=Plus/Minus Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596 ||||| | ||| | |||||| || | |||||||| ||| |||| | | |||||||| Sbjct 41349 TAGACGGACATGTTCATGGGAATCGATTTGTGGGGGTCGTATCCCTTGACCACAAAGTCC 41290 Query 145597 TCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGG----ATCCTGAGCCTGGGAAA 145652 || || | || |||| ||| | || ||| ||| | ||| ||| ||| || Sbjct 41289 TCGACCTTCCAGCCATCGATG-CTGCCGCCCTTCTCCCGCGTAATCTCCAGCTCGGGGAA 41231 Query 145653 GGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGT 145711 ||||| || || | || |||||| || || | || | ||||| || |||||||| Sbjct 41230 TGGCCGCGGT-TCGCGCTCCAGCTGGGTCTGGAGAGCGTCGATGTGGTCGATGTAGACGT 41172 Query 145712 GCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCA 145771 | ||||| |||| ||||||| ||| | |||||| | || | | ||| |||| || Sbjct 41171 GTGCGTCTCCCATGACGTGGGTGAGGCTTCCGGGCACCAGATCACACACGTGAGCGAGCA 41112 Query 145772 TGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCG 145831 ||| || ||||| | |||||||| ||||||||||| | || || |||||||| | | Sbjct 41111 TGTGCGTGAGCAGCGCATAGCTGGCAATGTTGAAGGGGATGCCAAGACCCATGTCGCAGG 41052 Query 145832 AGCGCTGGTACAGCTGGCAGGAGAGCT--CCC---------------------------- 145861 |||||||||| ||||||||| ||| | ||| Sbjct 41051 AGCGCTGGTATAGCTGGCAGTGGAGGTGGCCCTTTGGCTTGTTTTCTTCCGTGGGCTCTG 40992 Query 145862 ---CGCC--CGCCACGT----------------------AGAACTGGCACAGGAGGTGGC 145894 |||| |||| ||| |||||||| | | ||||| Sbjct 40991 CGGCGCCAACGCCCCGTCCGCGTCCAGGGTACGAGACGTAGAACTGGGCAAACATGTGGC 40932 Query 145895 AGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCC 145954 ||||||||| ||||||| | ||| ||||||||||||| |||||| | |||| Sbjct 40931 AGGGCGGCAAGGCCATGCTCTTGAAGTCTCGCGGGTTCCAGGCGCTGAGGATCATTCTCC 40872 Query 145955 TGCTCTCGGGGTTCCTCTTG---ATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCT 146011 | | ||| || ||| | || || | || |||||||| ||||||| Sbjct 40871 GGTCGTAAGGG---CTGTTGCGAAGCTTGTGGATGATCTCGGCCAGCTGGTCGACGCCCT 40815 Query 146012 GCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACC 146071 || ||| || | ||| | || |||||| |||| || ||||| | ||||||||| | Sbjct 40814 TGCCGGCGTAGTCGGCCTTTGCATCGACGTACTCGGCGCCAAAGTGTCGCCACTGGAAGC 40755 Query 146072 CGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGT 146131 |||||||||| |||||||| ||| ||| | ||| ||| ||| | | | ||||||| | Sbjct 40754 CGTAGACGGGGCCCAGGTCGCCGACCTCGCGGTGGGTCAGGCCGACGCTGTCGAGGAACT 40695 Query 146132 CCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTC 146189 | |||||||| ||| ||||||||||||||||||| | ||| ||| | | |||| Sbjct 40694 CGCGGGACCCATTGCCGTCCCAGATCTTGACGCCGACGTCGTTGAGGG--CGAGGGAGGA 40637 Query 146190 CGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTT 146249 ||| ||| |||||||||||| ||||| ||| ||| | | |||||||| || Sbjct 40636 TGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCGCGGAGGAAGACCCGTTT 40577 Query 146250 GGTGGTCAGCAGGGGGA 146266 || || ||||| |||| Sbjct 40576 TGTTGTGAGCAGCGGGA 40560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590059429614200