Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08] 2,355 sequences; 38,137,656 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq2279 111 1e-19 >seq2279 Length=74772 Score = 111 bits (122), Expect = 1e-19 Identities = 123/162 (76%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA--GTTGAACA 5651 ||||| || |||||||||||| ||| | |||||| ||| || ||| | |||||||| Sbjct 4904 AGCTGGGCAATTCGGTCGCCCTCCTTGATCTCGAAGTCG--GTTTCCGCATGGTTGAACA 4961 Query 5652 GCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGA 5711 | | || ||| ||||||||||| ||||| || ||||| || || |||||||| Sbjct 4962 GAAGAACCTTGACGGGTCCGCGGTAGTCAGCGTCGATGACGCCTGCACCGGTGTCGATGA 5021 Query 5712 AGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 |||||||| ||| ||||| ||||||||||| | ||||||| Sbjct 5022 AGTGCTTGGACGCAAGGCCAGAGCGGGGAGCAATACGGCCGT 5063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430042056766760