Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq2279 111 1e-19
>seq2279
Length=74772
Score = 111 bits (122), Expect = 1e-19
Identities = 123/162 (76%), Gaps = 4/162 (2%)
Strand=Plus/Plus
Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA--GTTGAACA 5651
||||| || |||||||||||| ||| | |||||| ||| || ||| | ||||||||
Sbjct 4904 AGCTGGGCAATTCGGTCGCCCTCCTTGATCTCGAAGTCG--GTTTCCGCATGGTTGAACA 4961
Query 5652 GCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGA 5711
| | || ||| ||||||||||| ||||| || ||||| || || ||||||||
Sbjct 4962 GAAGAACCTTGACGGGTCCGCGGTAGTCAGCGTCGATGACGCCTGCACCGGTGTCGATGA 5021
Query 5712 AGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753
|||||||| ||| ||||| ||||||||||| | |||||||
Sbjct 5022 AGTGCTTGGACGCAAGGCCAGAGCGGGGAGCAATACGGCCGT 5063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430042056766760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |