Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1903 336 6e-87
>seq1903
Length=20131
Score = 336 bits (372), Expect = 6e-87
Identities = 1045/1592 (66%), Gaps = 54/1592 (3%)
Strand=Plus/Minus
Query 363595 CAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGAC 363654
||| |||| || ||||| | | | |||||||||||| ||||||||||||| ||||
Sbjct 5417 CAGCTGTCCTCATGCTTCTTGGTCGACATGAAGGACGATAGTATCGAGGGTATCTATGAC 5358
Query 363655 ACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCA 363713
|| || |||| ||||| | |||||||| | || || || || || | | || ||||
Sbjct 5357 ACCCTGAAGACATGTGCCATGATTTCCAAAATGGCTGGTGGTATCGGCTTGAACG-TCCA 5299
Query 363714 CAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGG 363772
| | ||||| || | | ||||||| ||||| || ||| || || |
Sbjct 5298 CCGCATCCGTGCCACCGG-CTCTTACATTGCTGGCACCAACGGTACCTCCAACGGTATTA 5240
Query 363773 TTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGC 363832
||||||||||||| ||||| |||| ||||| || || ||||| |||||||| ||||
Sbjct 5239 TTCCCATGCTTCGAGTGTTCAACAACACTGCCAGATATGTCGATCAGGGTGGTAACAAGC 5180
Query 363833 GCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTG 363892
| || || ||||| || || |||||||| || ||||| | |||||||| ||||
Sbjct 5179 GTCCTGGTGCTTTTGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTTGAGTTCCTTG 5120
Query 363893 AGCTCCGGAA-AAACACGGGAA--AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCAC 363949
| ||||| || || ||||| || |||||| | || || || || ||||| ||| |
Sbjct 5119 ATCTCCGCAAGAACCACGGCAAGGAAGAGG---TCCGCGCTCGCGACTTGTTCCTTGCTC 5063
Query 363950 TTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTA--AGAATTGGTCACTCTT 364007
| ||| || | |||| || |||||||| || ||| | | | | | ||| | ||| |
Sbjct 5062 TCTGGATTCCCGACCTCTTCATGAAGCGTGTTGAG--AAGAACTTGGACTGGACGCTCAT 5005
Query 364008 TTGCCCACACGAATGTCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTA 364065
||||| |||||||||| || ||| | || || ||| || || || | | || |
Sbjct 5004 GTGCCCCAACGAATGTCCTGGCCTTGCTGACTGCTAT--GGCGAGGAGTTCGAGGCCTTG 4947
Query 364066 TACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGG 364125
|| || ||||| || ||||||| | ||| ||||| || | ||| |||||||| |||
Sbjct 4946 TATGAGAAGTACGAGAAGGAGGGACGTGGTCGCAAGACCATCCGCGCTCAGAAGCTGTGG 4887
Query 364126 TTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCG 364185
| | ||||| |||| | |||| ||||| || | |||| ||| | ||||| |||
Sbjct 4886 TATTCCATCCTGGAAGCCCAGACCGAGACTGGTAACCCCTTCATGCTCTACAAGGATCAC 4827
Query 364186 TGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTAC 364244
|||||||||||| |||||| || |||| || || | || |||| |||||| || ||
Sbjct 4826 TGCAACCGCAAGAGCAACCAAAAGAACCTGGGAACCA-TCCGCAGCTCCAACCTCTGCAC 4768
Query 364245 CGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGC 364304
|||||| || || ||| || || || ||| |||||| || ||| | || || | ||
Sbjct 4767 CGAGATCATCGAGTACTGTGCCCCAGATGAGGTTGCCGTGTGCAACTTGGCCTCTTTGGC 4708
Query 364305 GCTTCCGGCGTTTGT------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGT 364358
|| || || | || || || || | ||| || | ||| |||| ||
Sbjct 4707 CCTCCCTGCTTACGTCGACTACAACGAAGGCTGCTACGACTTTAAGAAGCTTCATGAAGT 4648
Query 364359 AACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATT 364416
||| | || | | | |||| || ||||| | || || || || ||||| |
Sbjct 4647 CACCAAGGTCGTTGTCC--GCAACCTTAACAAGATCATTGATGTCAACTACTATCCTGTC 4590
Query 364417 CCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGG 364471
| || || || ||| || ||||| || || || |||||| ||||||| ||||
Sbjct 4589 CAGGAGGCTCGCAACAGC-----AACATGCGCCACCGACCTATTGGTGTTGGTGTCCAGG 4535
Query 364472 GCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTC 364531
| || || |||| ||| | || ||| | ||||| || || || ||||| | |
Sbjct 4534 GTCTTGCCGACGCTTTCCTTGCCCTGCGCATGCCCTTTGAGTCTCCCGAGGCTCGCGAGC 4475
Query 364532 TAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGG 364591
| || ||| |||||||||| ||||| || || || || ||||| || | |
Sbjct 4474 TGAACAAGCAGATCTTTGAGACAATCTACCACGCGGCCCTGGAGGCTTCCATGGAGATTG 4415
Query 364592 CAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCC 364651
| || |||| ||| | | |||| || ||| || |||| | |||
Sbjct 4414 CCAAGGTGGAGGGTCCCTACGAATCGTTCAAGGGATCACCTGCATCCGAGGGCATCCTCC 4355
Query 364652 AGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCC 364710
| || || | ||| |||||| ||| |||| | ||| | ||||| |||| | | |
Sbjct 4354 AATTCGACATGTGGGATGTCAAGCCTTCTGACTTGTGGGAGTGGGACTCGCTCAAGGAGC 4295
Query 364711 AACGTTAAGAAGCATGGTACTCGCAA---CTCCCTCGTTACAGCGCCCATGCCCACGGCT 364767
| | ||| |||| ||| ||||| || ||||| || ||||||||||| ||
Sbjct 4294 -AGATCAAGGAGCACGGTGTGCGCAACAGCTTGCTCGT---CGCCCCCATGCCCACTGCC 4239
Query 364768 TCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTAT 364827
||| | ||||| || || ||||||||||||||||| || | || ||| | ||
Sbjct 4238 AGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTACACTTCCAACATCTAC 4179
Query 364828 TCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTT 364887
|| || || ||| |||| || || | ||| || || | || ||||||| ||
Sbjct 4178 CAGCGACGTGTCCTTGCCGGCGAGTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGACCTG 4119
Query 364888 TCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCT 364947
|||| ||| || ||| || |||||||||| |||||| || | || || ||
Sbjct 4118 GTCGACACCGGCCTCTGGTCCGATGCCATGAAGAACCGTATCATTGCTGAGAACGGCTCC 4059
Query 364948 GTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAA 365007
| |||||||| || | || |||||| | ||| | | ||||| ||||| |||||
Sbjct 4058 ATTCAGAACATCCCCAACATCCCCGAAGATATCAAGGCCTTGTACAAGACCGTGTGGGAG 3999
Query 365008 ATTTCCATGCG---AACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAG 365064
||||| ||| || | || | |||||||| ||||| |||||||| || |||
Sbjct 3998 ATTTCTCAGCGCCAAATTGTC---CAGATGGCGGCTGATCGTGGTGCTTTCATTGACCAG 3942
Query 365065 AGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCAT 365124
|||||| | ||| | ||||| | || || | |||| |||| ||||||
Sbjct 3941 TCCCAGTCCCTGAACATCCACATGAAGGACCCCACAATGGGCAAGATTACCAGCATGCAC 3882
Query 365125 TTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
||| || ||||| ||||| ||||| ||
Sbjct 3881 TTCACTGGCTGGAAGCTTGGTCTCAAGACCGG 3850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303314273341610
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