Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1667 86.0 5e-12
>seq1667
Length=31153
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || | || || || | || ||| |||| || ||| | |
Sbjct 22486 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCC 22545
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| |||||||| | ||||| ||||| ||||| || ||||| ||||| || ||
Sbjct 22546 GATACCATCGACAACGTCAAGTCTAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 22605
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||||| | |||||||||||||| |||| | ||| | ||| || |||
Sbjct 22606 CAGCGTCTGATTTTTGCTGGCAAGCAACTCGAGGATGGCCGAACTCTGTCCGACTACAAC 22665
Query 24171 ATTCAAAAAGAATCTAC 24187
|| || || || |||||
Sbjct 22666 ATCCAGAAGGAGTCTAC 22682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429923660165025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |