Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq1903 161 9e-35
seq1667 123 2e-23
seq1790 116 3e-21
seq2135 98.7 9e-16
>seq1903
Length=20131
Score = 161 bits (178), Expect = 9e-35
Identities = 851/1328 (64%), Gaps = 53/1328 (4%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| ||||| ||||||||||| | ||||| ||| || | ||| || ||| ||||
Sbjct 4141 TTGACAACCTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGC 4200
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| |||||||| || || | ||| | || ||||||||| || ||
Sbjct 4201 TCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTGGGCATGGGGGCGACG 4260
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| || ||||||| ||||||| |||||| | ||||| |||| |||| |||||
Sbjct 4261 AGCAAGCTGTTGCGCACACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCAC 4320
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTC-GCTGGCGGGGCT 145296
| || ||| | || |||||||||||| | || | |||||||| | || || | |
Sbjct 4321 AAGTCAGAAGGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGAT 4380
Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTC---GCAACTCGCCTCCAG 145353
||||| || || ||| ||| ||||| | ||| | || ||||||||
Sbjct 4381 CCCTTG-AACGATTCGTAGGGACCCTCCACCTTGGCAATCTCCATGGAA---GCCTCCAG 4436
Query 145354 AGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGC-TTCATCG---C 145409
|| || || |||||||| || ||| |||| ||| |||| | |||
Sbjct 4437 GGCCGCGTGGTAGATTGTCTCAAAGATCTGCTTGTTCAGC----TCGCGAGCCTCGGGAG 4492
Query 145410 TCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGA 145469
||| | ||||||||||| | ||||| ||||| || ||||| | || || || |
Sbjct 4493 ACTCAAAGGGCATGCGCAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAA 4552
Query 145470 TGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCG 145528
| || || || ||||||||| | | ||| || || |||||| | | | || ||
Sbjct 4553 TAGGTCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGGACAGGATAGTAGTTGAC-ATCA 4611
Query 145529 ATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCA 145588
|| || || || | ||| || || || ||||| || | | | | ||| | ||||||
Sbjct 4612 ATGATCTTGTTAAGGTTGCGGACAACGACCTTGGTGACTTCATGAAGCTTCTTAAAGTCG 4671
Query 145589 AACCGAGCC-TCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAAC 145647
| | |||| |||| | | || | | || ||| | || ||||| || || ||
Sbjct 4672 TAGC-AGCCTTCGTTGTAGTCGACGTAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCACAC 4730
Query 145648 TGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGAT 145707
|| ||| || | | | | ||| | | |||||||| ||| | ||| | |||
Sbjct 4731 GGCAACCTCATCTGGGGCACAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGAT 4790
Query 145708 GGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGG 145767
||||||||| || | || || || || | |||||| ||||||||||||||| | ||
Sbjct 4791 GGTTCCCAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGG 4850
Query 145768 TCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTG 145827
|||||||| ||| | |||| ||| || || | ||| || || | ||
Sbjct 4851 GTTACCAGTCTCGGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTGAGCGCGGA--TG 4908
Query 145828 CTGCTGGTA--GCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCG 145885
| || | || ||||| | ||||| ||| || | |||| ||| | ||
Sbjct 4909 GTCTTGCGACCACGTCCCTCCTTCTCGTACTTCTCATACAAGGCCTCGAACTCCTCGCCA 4968
Query 145886 TAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCG 145945
||||| || | ||||| ||||| | |||||| ||||| |||| ||| | |||
Sbjct 4969 TAGCAGTCAGCAAGGCCAGGACATTCGTTGGGGCACATGAGCGTCCAGTCCAAGTTCTTC 5028
Query 145946 TTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTG 146005
| || |||| ||| || | || || | ||| || || | ||||||||| || |
Sbjct 5029 TCAACACGCTTCATGAAGAGGTCGGGAATCCAGAGAGCAAGGAACAAGTCGCGAGC---G 5085
Query 146006 CAATCCTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGCGT 146060
| |||| | || || ||| || | || ||| | ||| | ||| ||| ||||
Sbjct 5086 CGGACCTCTTCCTTGCCGTGGTTCTTGC-GGAGATCAAGGA-ACTCAAAGACGTCGGCGT 5143
Query 146061 GCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGT 146117
|||| || || | |||| ||| | || || || ||| |||||||| || || |
Sbjct 5144 GCCAGGGCTCGAGGTAGATGGCAAAAGCACCAGGACGCTTGTTACCACCCTGATCGACAT 5203
Query 146118 GACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCG 146177
| | ||||||| || || || | |||||| | ||| ||| ||||| |
Sbjct 5204 ATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTGGAGGTACCGTTGG 5263
Query 146178 T---AG-AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCG 146233
| || | | || | |||| || || | || || || |||| ||||| |||
Sbjct 5264 TGCCAGCAATGTA----AGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCA 5319
Query 146234 CC-GCCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGC 146291
|| ||| | ||||| || ||| || ||| | || || || ||||| || || || |
Sbjct 5320 CCAGCCAT-TTTGGAAATCATGGCACATGTCTTC-AGGGTGTCATAGATACCCTCGATAC 5377
Query 146292 TATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGC 146349
||||| |||| ||| ||| || ||||| ||| ||| ||| ||| ||| || || ||
Sbjct 5378 TATCGTCCTTC--ATGTCGACCAAGAAGCATGAGGACAGCTGGGCCTGCGGGGTACCGGC 5435
Query 146350 CGAGAACA 146357
|||||
Sbjct 5436 GTTGAACA 5443
>seq1667
Length=31153
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| ||||| || || | || |||||| || |||||||| |||||
Sbjct 23468 GCCACCACGAAGACGAAGCACCAAGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCT 23409
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| |||||| ||| || |||||||| || || |||| || ||||||||||| |||||
Sbjct 23408 CAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGAGG 23349
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| || || ||||| | || | || |||| || || |
Sbjct 23348 AATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGATTCCAC 23289
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | || || || || ||||| || ||||||||||||||
Sbjct 23288 CTCGAGGGTGATTGTCTTGCCTGTGAGAGTCTTGACGAAAATCTGCAT 23241
Score = 116 bits (128), Expect = 3e-21
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | || |||||||| ||||||||||| |||
Sbjct 23011 CCACCACGGAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 22952
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| ||||||||||| ||| |||| || ||||||||||| ||||||
Sbjct 22951 AGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGG 22892
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | ||||| | ||||| |
Sbjct 22891 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCAGATGACTCCACC 22832
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|||| ||| | ||| || ||||| || || || ||||
Sbjct 22831 TCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGA 22795
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || | || | || |||||||||||||||||| ||||||
Sbjct 23239 CCACCACGCAGACGGAGGACAAGGTGAAGTGTGCTCTCCTTTTGAATGTTGTAGTCGCTC 23180
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| || || |||| | ||||||||| ||||| |||
Sbjct 23179 AAAGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCCGGGGGG 23120
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| ||| | | || ||||| | || | || || | ||||| |
Sbjct 23119 ATACCCTCCTTGTC-CTGAATCTTTGACTTGACATTGTCGATGGTGTCTGATGACTCAAC 23061
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||| | || || ||||| ||||||||
Sbjct 23060 CTCCAATGTGATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 23013
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | || | ||| |||||||| || |||||||| ||| |
Sbjct 22712 CCACCACGAAGGCGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAC 22653
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| || |||||||| || | || | |||||||||||| |||||
Sbjct 22652 AGAGTTCGGCCATCCTCGAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGAGGA 22593
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | ||||||| ||||| |
Sbjct 22592 ATGCCCTCCTTGTCCTGGATCTTAGACTTGACGTTGTCGATGGTATCGGACGACTCCACC 22533
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| ||| | ||| || ||||| || || || ||||| || ||||||
Sbjct 22532 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATG 22485
>seq1790
Length=95376
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||||| || | || | ||| |||||||| || |||||||| |||
Sbjct 27668 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 27727
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| |||||||| || ||| |||| || |||||||||||||| ||
Sbjct 27728 AGGGTTCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGA 27787
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 27788 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 27847
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || || || || || || ||||||||||||||
Sbjct 27848 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 27894
>seq2135
Length=79206
Score = 98.7 bits (108), Expect = 9e-16
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| | |||||| ||||| ||||||||||| || |||
Sbjct 76472 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 76413
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || |||||||||||||| || || || || ||||| ||| || ||||| | |
Sbjct 76412 TCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 76353
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || |||| |||||||| || | ||| | ||| || || || || || || ||||
Sbjct 76352 CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 76293
Query 131225 AA 131226
||
Sbjct 76292 AA 76291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471998905123200
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