Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq535 187 3e-42
>seq535
Length=62126
Score = 187 bits (206), Expect = 3e-42
Identities = 488/733 (67%), Gaps = 25/733 (3%)
Strand=Plus/Plus
Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG-AAGACGTAC 92985
|| || ||||| || |||||||| ||||| | ||||| || || ||| || |
Sbjct 14926 TCGGCAACAAACTCAATGTACTGCTTCATCAGGCTGGAGTTCATGCCAAGCAAGGCGCAG 14985
Query 92986 AGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCT-- 93043
|| ||||| ||||||||||| || | ||| ||| || || || | | ||| ||
Sbjct 14986 GGG-AGAGCCTCGGTCAAGAACTCCTGCTCAATTCGGACAGCGTCGGTGATGATGTCACG 15044
Query 93044 -ATTACTCTACTATTTGGT--GGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAG 93100
|| | ||| || ||| |||| ||| | | | || || | ||| ||||||
Sbjct 15045 GATCA-TCTCCTTGCTGGCACGGTTCTTG----AGGTGAGAGTGCAGCAGGCAGGCAAAG 15099
Query 93101 TCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAAC 93160
|| || || | ||| || || || || || | ||| ||| || || | ||| || |
Sbjct 15100 TCAGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACCAGGCATG 15159
Query 93161 AGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCC 93220
|| ||||| ||||||| ||| || || || ||||| ||| || || || || ||
Sbjct 15160 AGACCTCGCTTCTTGACCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATGCCCTCG 15219
Query 93221 ACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG--CTGA-TCCAT 93277
||||| ||||| || || | || | |||||| | || || || |||| ||||
Sbjct 15220 ACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAG---GAAGAGTTCTTGTCCTGAATCCAC 15276
Query 93278 TTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGG 93337
|| | ||||| ||||| ||||| ||| ||||| | || || || ||||| || |||
Sbjct 15277 TTGATGGCCCAGTCGGCCTTTTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAGG 15336
Query 93338 TAATCTCGCTCGTCCGAATCTCGT--ATGTATGTATCGATTAACAGAGAATACATTTCAG 93395
|| |||| | | |||| | ||||| || ||||| | ||| || || | || |
Sbjct 15337 TAGCTGCGCTGG--CTGTTCTCCTTGATGTAGGTGTCGATGAGCAGGGAGTAGGTCTCGG 15394
Query 93396 AATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCA 93455
| |||| |||||||| || ||||| |||||||| |||| ||| || | |||||| |
Sbjct 15395 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCTGGA 15454
Query 93456 CTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaa 93515
| || || | ||| || || || || ||||| || ||||| || || ||||| |
Sbjct 15455 CCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCAAAGA 15514
Query 93516 aaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCCAATCGG 93572
| |||| || || || || | ||||| ||||| || || || | ||| |||
Sbjct 15515 AGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTCGT 15574
Query 93573 ATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGT 93632
||||| || || ||||| | |||||| | ||||| || || || || || |||||||
Sbjct 15575 GCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAGGCCTCGGCCTTTTTGT 15634
Query 93633 ACATATCCCATAT 93645
|||| | ||| ||
Sbjct 15635 ACATTTGCCAAAT 15647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556844407410200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |