Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2057 102 2e-16
>seq2057
Length=81121
Score = 102 bits (112), Expect = 2e-16
Identities = 107/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760
||||||| ||||| |||||||| ||||| |||||| ||||| |||| | | ||
Sbjct 3437 CTCACTCCCGCATGCGCGGTCTGTCTGGTGGCCAGCGTGTCAAGACTGTCCTGGCTGCTT 3496
Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820
||||| ||||| | || ||| ||||||| || ||||||||||||||||||||||| ||
Sbjct 3497 GCTCT-TGGCAGCGACCCCACTTGATCGTCCTTGACGAGCCTACCAACTATCTGGATCGT 3555
Query 280821 GAGAGCCTGGGCGCTCTG 280838
|| ||||| ||||||
Sbjct 3556 GACTCTCTGGGTGCTCTG 3573
Score = 98.7 bits (108), Expect = 2e-15
Identities = 159/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| || || || || |||| |||||| || || || |||| ||||||||||| |||
Sbjct 2035 GGCGAAGACCTTTGCAACTGCACTTTCTCTCTTGCCTACGGTGCCAAGATTCTGCTCAAC 2094
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|||| ||| | |||||||||| | || || ||||| ||||||||| || |
Sbjct 2095 CAAACCCATCTCCGCCTCAAGCGTGGTCAGCGTTACGGTCTTTGCGGTCCCAACGGTTCC 2154
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|||||| |||||| ||||| ||||| |||| ||| | | ||| ||||| | |||
Sbjct 2155 GGTAAGTCCACTCTCATGCGTGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 2213
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCT 279569
||||| | ||| || | || ||||||||| | |||||| ||
Sbjct 2214 GAGCGAGGTCAAGACTGTCTTCGTTGAGCACGACCTTGACTCCGCT 2259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027805786630555
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |