Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq535 196 9e-45
seq1790 179 7e-40
seq1667 161 2e-34
seq2057 102 2e-16
>seq535
Length=62126
Score = 196 bits (216), Expect = 9e-45
Identities = 576/876 (66%), Gaps = 29/876 (3%)
Strand=Plus/Plus
Query 9933 TTCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCC 9992
|||||||| || ||||||||||| || | || || |||||||||||||| ||||||
Sbjct 14785 TTCATGACACCAGCCTTCTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCA 14844
Query 9993 TCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCC----AAACTGCTTGGG 10048
|||| |||||| ||||||||||||||||||||| | | | | || |||
Sbjct 14845 CCGAGAGAAATGTTCTCCATGAAGTCAAAGGGGTTG--GAAGACTTGTAGAC--CTTTTC 14900
Query 10049 GTAACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTC 10108
|| ||||| || | | |||||| || || ||||| |||||||| ||||||||
Sbjct 14901 GTTGCCGAGAGCGACCAGCAGGCGGTCGGCAACAAACTCAATGTACTGCTTCATCAGGCT 14960
Query 10109 CGAGTTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGC 10168
||||||||||||| || | |||||||| || ||| | ||| |||| || |
Sbjct 14961 GGAGTTCATGCCAAGCAAGGCGCAGGGGAGAGCCTCGGTCAAGAACTCCTGCTCAATTCG 15020
Query 10169 GACCGCTTCCTCGACGATGCTCTTTACCACGTCAAGG--GACAGCTTGTTCTCGAGCTTC 10226
||| || || || |||| | || || | | || ||||| ||| |
Sbjct 15021 GACAGCGTCGGTGATGATGTCACGGATCATCTCCTTGCTGGCACG--GTTCTTGAGGTGA 15078
Query 10227 GAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTG 10286
|| | ||| || |||| | ||| || ||||| || || ||||| |||||||
Sbjct 15079 GAGTGCAGCAGGCAGGCAAAGTCAGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTG 15138
Query 10287 GACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGAC 10346
|| || |||||| |||||||| || || || | |||||| |||| | || |
Sbjct 15139 GAAAAGGTCAGACCAGGCATGAGACCTCGCTTCTTGACCCAGAAGATGGAGGCAAAGGCA 15198
Query 10347 CCGGAGAACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGA-G 10403
||| ||| ||||| ||||| ||| | |||| || ||||||| || ||||| |
Sbjct 15199 CCGCTGAA--GAAGATGCCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAG 15256
Query 10404 CGGTCGCG--CGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCG 10461
| || | | || | || |||||| | ||||| || | | | ||| || |
Sbjct 15257 AGTTCTTGTCCTGAATCCACTTGATGGCCCAGTCGGCCTTTTTGCGAATGCAAGGAATGG 15316
Query 10462 TCTCGATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGA 10521
|||| || || | |||||| | | | |||| | | | |||| || | || | ||
Sbjct 15317 TCTCAATGGCGTTGAAGAGGTAGCTGCGCTGGCTGTTCTCCTTGATGTAGGTGTCGATGA 15376
Query 10522 GCAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATA 10580
|||||||||| |||| ||||| | |||| | |||| | ||||||| |||
Sbjct 15377 GCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAT- 15435
Query 10581 CGTGCCGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATG 10640
|| ||| |||| | ||| || || ||| | | ||||||||| | || |||
Sbjct 15436 CGAGCCTCGGGGATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATG 15495
Query 10641 CCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTC 10700
||||| | | ||||||||| | |||||||| |||||||| ||| |||||||||
Sbjct 15496 CCATCAGAGGCGGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTC 15555
Query 10701 A----GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCA 10756
| ||| || |||||| || ||||| | || | | ||| || |||||||
Sbjct 15556 AGGCGGTTGTT----CCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 15611
Query 10757 GAAAGTGGCAACGGCCTTCTTGTACATCTGGAAAAT 10792
||| | ||| ||||||| |||||||| || ||||
Sbjct 15612 GAAGGAGGCCTCGGCCTTTTTGTACATTTGCCAAAT 15647
>seq1790
Length=95376
Score = 179 bits (198), Expect = 7e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| |||| ||| || || ||||| || |||||||| || ||||||
Sbjct 27668 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 27727
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || | || || ||||| || |||
Sbjct 27728 AGGGTTCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGA 27787
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | |||||| ||||||||||| | || || ||
Sbjct 27788 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 27847
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || |||||||||||||||||||| ||||||||
Sbjct 27848 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 27894
>seq1667
Length=31153
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | |||| ||| || || ||||| || |||||||| || |||||
Sbjct 22712 CCACCACGAAGGCGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAC 22653
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||||| || || || || || | || ||||| || |||
Sbjct 22652 AGAGTTCGGCCATCCTCGAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGAGGA 22593
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| |||||||| || | || || ||
Sbjct 22592 ATGCCCTCCTTGTCCTGGATCTTAGACTTGACGTTGTCGATGGTATCGGACGACTCCACC 22533
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || ||||||||||||||||| || |||||
Sbjct 22532 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 22486
Score = 158 bits (174), Expect = 2e-33
Identities = 176/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286
|||| | || || ||||| || | |||||||| |||||| ||| || |||||||| |
Sbjct 23475 TTTACTGGCCACCACGAAGACGAAGCACCAAGTGCAGCGTGCTCTCCTTCTGGATGTTGT 23416
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
| ||| | || | || ||||| | |||||| || || || || | | || ||||
Sbjct 23415 AGTCGCTCAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGT 23356
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406
| || |||||||| |||||||| |||||||| | ||||||| ||||||||||| | |
Sbjct 23355 CAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAG 23296
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| || || | |||||| || || || ||||| ||||||||||| ||||||||
Sbjct 23295 ATTCCACCTCGAGGGTGATTGTCTTGCCTGTGAGAGTCTTGACGAAAATCTGCAT 23241
Score = 149 bits (164), Expect = 1e-30
Identities = 163/217 (75%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || |||||||| || || ||||| || ||||||
Sbjct 23011 CCACCACGGAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 22952
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || | | || ||||| || ||
Sbjct 22951 AGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGG 22892
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | ||||||| || ||||| || | ||| || ||
Sbjct 22891 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCAGATGACTCCACC 22832
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| | ||||||||| ||||| ||||||||||||||||
Sbjct 22831 TCGAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGA 22795
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || ||| ||| ||||| ||||| || |||
Sbjct 23239 CCACCACGCAGACGGAGGACAAGGTGAAGTGTGCTCTCCTTTTGAATGTTGTAGTCGCTC 23180
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | || || || | |||||| || || || ||||| | || || || || ||
Sbjct 23179 AAAGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCCGGGGGG 23120
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| |||||||||| |||||| ||||||||||||| ||| || ||
Sbjct 23119 ATACCCTCCTTGTCCTGAATCTTTGACTTGACATTGTCGATGGTGTCTGATGACTCAACC 23060
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| |||||||| || || || | ||||||||||| ||||||||
Sbjct 23059 TCCAATGTGATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 23013
>seq2057
Length=81121
Score = 102 bits (112), Expect = 2e-16
Identities = 666/1050 (63%), Gaps = 68/1050 (6%)
Strand=Plus/Minus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| | || ||| |||| |||||||| ||||| ||| || ||
Sbjct 3044 CGCCACTGGATGTACTCGGAAGGAGTCTTGTCAAGGTGGTTATCAATGTGGGCAAAGGCG 2985
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100
||||| | ||| || || || ||||| |||| | | ||| | || ||
Sbjct 2984 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCGCCACCGGTGGGG 2925
Query 225101 -TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
|| || || ||| ||| || ||||| || |||| |||||| ||||| ||||| || ||
Sbjct 2924 ATGAGC-TCACCGCAGAGAACGTTGATCAGAGTAGACTTGCCAGCACCGTTGGGACCGAT 2866
Query 225160 CACGCCAATCCGGGAT------GA-CATTGCAACCTGCGAGTTCACGTTGCTGAAGATCT 225212
||| |||| || || || || || || ||| | || | ||| | | |
Sbjct 2865 AACGGCAATACGAGAGCCAAGAGAGCACTGGAAGCTG--ATCTCCTGGATCTGGGGCTTT 2808
Query 225213 CAGGGCCAGTTTGGTAAGCAAAGGCCAC------GCCACGCAGCTTCATGATGGCACGGT 225266
||| | | |||| |||| || | ||||||| |||||| |
Sbjct 2807 GAGGTACCGG--GGTACTGGAAGGACATCTTGGTGGCACGCAG------GATGGCCTTGG 2756
Query 225267 CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGT 225326
|||||| | | |||||| ||||| |||||||||||||| ||| || | | |
Sbjct 2755 CCTTGGTCTTGACACCCTCAAGGAAACCGGGCTCGGGGAAGGAGAACTCCATCTCGGAGG 2696
Query 225327 CCTTCAGGTCGTAGTAAGATGCAGCCTCGGGT---CGCTTTGCCACGAAAGCAGACAGGT 225383
| || |||||||| || || || ||||| ||||| | |||||
Sbjct 2695 CACCGAGTTCGTAGTAGGACTTGGCGGAAGGAACACGCTTG---ACGAACTCCTTCAGGT 2639
Query 225384 TTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACT 225442
| || ||| | | ||||||| || |||||| || || || ||| | ||| ||
Sbjct 2638 TACCACGGTAACGCTTAAGCTTGAA--TCG-CTCGTAGTGGACGATGTGCTG-GCAGACG 2583
Query 225443 GCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCTT 225501
||||||||||| |||||||| || || |||||||| | || | | || || |
Sbjct 2582 TTGTCAAGGAAGCTGGAGTCGTGAGAGACGATGATGGAAGTGCAAG---GGGAG-CCGGT 2527
Query 225502 GAGGTGCGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCA 225560
||||| || | |||||| ||||| | ||||||| |||||| ||||| ||||| |
Sbjct 2526 GAGGTA-GTCCTCGAGCCACTTGACGTTCTTCACGTCCAAGTGGTTAGTAGGCTCGTCGA 2468
Query 225561 GAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGC 225620
| ||||| || |||| | | || || || || |||| |||||||| ||||| |
Sbjct 2467 GCAGCAGAATATCAGGAGCCTCGAAGACAGCACGGCACAGAGCGAGCTTCATCTTCCAAC 2408
Query 225621 CCCCGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTC---CA 225677
| |||||||||| | || | | | | ||| |||||| |||| ||
Sbjct 2407 CACCGGACAGGGCGGAAATCTCGCCCTGGACCATCTGCTCGGTGAAGCCGAACTCGTCCA 2348
Query 225678 GGAGCGTCTGGATAATGCGCTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGA 225737
|| || ||| || | | || | |||| || | || |||| |||| | ||
Sbjct 2347 GGCGCTTCTCGACA-TCAGCCTGAGAGA--------CGTCGACCTTGGCCTCGG-CAAGC 2298
Query 225738 --------GGT--AATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCC 225787
||| | || |||||| || | ||| | ||||| |||||| ||
Sbjct 2297 TTCTTCATGGTCCAGTCGATGGTGGTCATCTCAGTATCAGCGGAGTCAAGGTCGTGCTCA 2238
Query 225788 ACGTACACCGTCCGGAGCT-GAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAAT 225846
||| | || ||| || || | || | |||||| ||||| | ||| | || ||
Sbjct 2237 ACGAAGACAGTCTTGACCTCGCTCTGCTT-GGGGAAACCCTCGACCTGCTCGTTGTTGAT 2179
Query 225847 CGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCC 225906
||||| | || || ||| || | |||||||||||| || |||||| | | ||
Sbjct 2178 GGCACGCATGAGAGTGGACTTACCGGAACCGTTGGGACCGCAAAGACCGTAACGCTGACC 2119
Query 225907 GCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAA 225966
||||||| | ||| | || ||| || || |||||| |||| |||||||| |||||
Sbjct 2118 ACGCTTGAGGCGGAGATGGGTTTGGTTGAGCAGAATCTTGGCACCGTAGGCAAGAGAGAA 2059
Query 225967 CTCGCAATCGCACAGGTCCTCACCCTCCTC 225996
||| | ||| ||||| || ||||||||
Sbjct 2058 AGTGCAGTTGCAAAGGTCTTCGCCCTCCTC 2029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921595269740600
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