Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq535 102 2e-16
>seq535
Length=62126
Score = 102 bits (112), Expect = 2e-16
Identities = 177/255 (69%), Gaps = 2/255 (1%)
Strand=Plus/Minus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||||| || || || || || |||| ||| | ||| ||| | || ||| |
Sbjct 15038 ATCATCACCGACGCTGTCCGAATTGAGCAGGAGTTCTTGACCGAGGCTCTCCCCTGC-GC 14980
Query 243562 CTTA-TTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620
||| ||||||||||||| || ||| |||||||| || || || ||||||||| |
Sbjct 14979 CTTGCTTGGCATGAACTCCAGCCTGATGAAGCAGTACATTGAGTTTGTTGCCGACCGCCT 14920
Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680
| |||| || || | || || || ||||| || |||||||||| ||| |||||
Sbjct 14919 GCTGGTCGCTCTCGGCAACGAAAAGGTCTACAAGTCTTCCAACCCCTTTGACTTCATGGA 14860
Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACG 243740
| |||||| || || || || ||||||||||| ||||| ||| || || ||
Sbjct 14859 GAACATTTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAGAA 14800
Query 243741 CCCTGGTGTGATGAA 243755
||||||| |||||
Sbjct 14799 GGCTGGTGTCATGAA 14785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102846722319250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |