Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08] 2,355 sequences; 38,137,656 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1903 239 5e-58 seq535 140 4e-28 >seq1903 Length=20131 Score = 239 bits (264), Expect = 5e-58 Identities = 1173/1850 (63%), Gaps = 44/1850 (2%) Strand=Plus/Plus Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617 |||| | |||| |||||||| || ||||| | || ||||||||||| || ||| Sbjct 3796 TCAACGGTGAATTGAATGGGAGCAGCTGCGGCCTGAGTGCGCAGGTAGTACATGCCGGTC 3855 Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677 ||||| || |||||||| || | ||||| || | |||| | ||| || Sbjct 3856 TTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGGTCC 3915 Query 113678 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATA 113737 | |||| || ||||| ||||| || || ||||| |||||||| |||||||| Sbjct 3916 TTCATGTGGATGTTCAGGGACTGGGACTGGTCAATGAAAGCACCACGATCAGCCGCCATC 3975 Query 113738 TCAATCACATCCTTCATCTTGA----TTTCCCACACAGTTCTGTAGAGGTTCTTAATATC 113793 | | || || || ||| | |||||||| || |||| | | ||| ||||| Sbjct 3976 TGGA-CA-AT--TTGGCGCTGAGAAATCTCCCACACGGTCTTGTACAAGGCCTTGATATC 4031 Query 113794 ATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCAT 113853 || ||||| | ||| || || |||||||| | | | || | | |||||| Sbjct 4032 TTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTTCAT 4091 Query 113854 ATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAAC 113910 | | |||||||| || | | || |||| |||| || |||||||| Sbjct 4092 GGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTT---GAGAAGCCAGGGGTTGACAAC 4148 Query 113911 AACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCA 113970 ||||| || || ||| |||| | | ||||| |||| ||||| ||||| ||||| Sbjct 4149 CTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCA 4208 Query 113971 CTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 114030 ||| ||||| |||| || |||| ||| ||| ||||||||||| || | ||| | ||| Sbjct 4209 CTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTGGGCATGGGGGCGACGAGCAAGCT 4268 Query 114031 GTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTT 114090 ||| || | ||| | ||| | || | |||||||| | |||||| || | | Sbjct 4269 GTTGCGCACACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAAGTCAGA 4328 Query 114091 TGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAA 114150 | || | | |||||| || || |||||||| || | ||| || || ||||||| || Sbjct 4329 AGGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCCCTTGAA 4388 Query 114151 TGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATA 114210 | ||||| || ||||| |||| || | || | ||||| ||||| ||||| || Sbjct 4389 CGATTCGTAGGGACCCTCCACCTTGGCAATCTCCATGGAAGCCTCCAGGGCCGCGTGGTA 4448 Query 114211 CATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG 114270 ||||||||||| || | |||| | |||||| || ||||| | | || Sbjct 4449 GATTGTCTCAAAGATCTGCTTGTTCAGCTCGCGAGCCTCGGGAGACTCAAAGGGCATGCG 4508 Query 114271 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 114330 || || | || || ||||| |||||||| | ||||| || || || | ||| Sbjct 4509 CAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATAGGTCGGTGGCGCAT 4568 Query 114331 ATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 114390 || || ||||| || || ||||| | || ||| || | | | || || || Sbjct 4569 GTTGCTGTTGCGAGCCTCCTGGACAGGATAGTAGTTGACATCAATGATCTTGTTAAGGTT 4628 Query 114391 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 114450 | || ||||| |||| |||||||||||| | | || | | || | | Sbjct 4629 GCGGACAACGACCTTGGTGACTTCATGAAGCTTCTTAAAGTCGTAGCAGCCTTCGTTGTA 4688 Query 114451 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 114510 | ||| || ||| ||||| | || |||| || ||||| | |||||| | Sbjct 4689 GTCGACGTAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCACACGGCAACCTCATCTGGGGC 4748 Query 114511 AGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 114570 | |||||| || || || || || | || || || ||||| |||| ||||||||| Sbjct 4749 ACAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTTTG 4808 Query 114571 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 114630 || ||| ||| || ||||||||| |||||| | || | || ||||| || || Sbjct 4809 GTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTG 4868 Query 114631 GGACTTGAGAATAGCCTTCCAGACATCGGCGGCTG-GCACAG-TGGCGTTG---GCTCGC 114685 || | || || | | ||| | || ||| || | | ||| ||| | || Sbjct 4869 GGCTTCCAGGATGGAATACCA-----CAGCTTCTGAGCGCGGATGGTCTTGCGACCACGT 4923 Query 114686 CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 114745 ||||||| ||||||||| || | ||| || ||||| || || | || | || Sbjct 4924 CCCTCCTTCTCGTACTTCTCATACAAGGCCTCGAACTCCTCGCCATAGCAGTCAGCAAGG 4983 Query 114746 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA--CCCTCCTCAACACGCTTCA 114803 || || | | ||||| | ||| | ||| | ||| || |||||||||||||| Sbjct 4984 CCAGGACATTCGTTGGGGCACATGAGCGTCCA--GTCCAAGTTCTTCTCAACACGCTTCA 5041 Query 114804 TGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 114863 |||||||||| || ||||||||||| ||| | || ||| ||| | ||||| | | Sbjct 5042 TGAAGAGGTCGGGAATCCAGAGAGCAAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGC 5101 Query 114864 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 114923 | || || || | || | || || | || || |||||||| || || ||||| | Sbjct 5102 CGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGA 5161 Query 114924 CCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCAT 114977 || | | || | |||| |||| |||| | ||||| || || ||| | Sbjct 5162 TGGCAAAAGCACC---AGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGT 5218 Query 114978 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG 115037 | || || |||||||| ||||| ||||| | || || || || || ||| || Sbjct 5219 TGAACACTCGAAGCATGGGAATAATACCGTTGGAGGTACCGTTGGTGCCAGCAATGTAAG 5278 Query 115038 ACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 115097 | |||| | || |||| || || || ||||| || ||| || || || Sbjct 5279 AGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCACCAGCCATTTTGGAAATCA 5338 Query 115098 GCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAA 115157 || || | | || || | ||||| || ||||| || |||| | ||| | Sbjct 5339 TGGCACATGTCTTCAGGGTGTCATAGATACCCTCGATACTATCGTCCTTCATGTCGACCA 5398 Query 115158 GGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGA-GGGTTGGTGTCGC 115215 |||||| |||| || ||||| || ||||| |||||||| | |||| || | || Sbjct 5399 AGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCGGCGTTGAACAGGGGTGGGGGAGGC 5457 Query 115216 GTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCT 115273 ||| ||| | | |||| ||||| | ||| ||||||| ||| |||||| Sbjct 5458 ATGGGTGA--AGAACTTGCTAGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCG 5515 Query 115274 TCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATA 115333 || || || || | || |||||||||| ||||| || || || | | | Sbjct 5516 TCTCCCCAGATGCCAACAGACACCCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTG 5575 Query 115334 CCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 ||||| ||| || | ||||| | ||||| ||||||| ||||| || Sbjct 5576 CCATCAAGCTTCAGAAGGTATGACCGCTCCAGAGTCTTGAAGCCAAAGTA 5625 >seq535 Length=62126 Score = 140 bits (154), Expect = 4e-28 Identities = 351/525 (67%), Gaps = 15/525 (3%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| |||||||| ||||| |||||||| || || || ||| ||| || Sbjct 15093 GGCAAAGTCAGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 15152 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || | ||| | ||| ||||||||| Sbjct 15153 AGGCATGAGACCTCGCTTCTTGACCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 15212 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| || || || |||| || |||| |||||||| || || |||| Sbjct 15213 GCCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGA---AGAGTTCTTGTCCTG 15269 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 || |||||| || ||||| | |||||||| || || || | ||||| || || | Sbjct 15270 AATCCACTTGATGGCCCAGTCGGCCTTTTTGCGAATGCAAGGAATGGTCTCAATGGCGTT 15329 Query 126283 AAAGA-GTTCCTTC-TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 126340 |||| || || | | ||| | || |||||||| | || ||||| || || Sbjct 15330 GAAGAGGTAGCTGCGCTGGCTGTT--CTCCTTGATGTAGGTGTCGATGAGCAGGGAGTAG 15387 Query 126341 GTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 126399 || ||| ||||| | | ||| || | ||| | ||||||| | || || ||| Sbjct 15388 GTCTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGG 15446 Query 126400 TATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459 ||||| ||||| || || | | ||||| ||||| ||||| || | Sbjct 15447 GATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGC 15506 Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 126516 ||||| || |||||||| | ||||| | || || | ||||||| || | || Sbjct 15507 GGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTT 15566 Query 126517 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||||| |||||||| || ||||| | ||| || || ||||| Sbjct 15567 CCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 15611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597336015403400