Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1903 239 5e-58
seq535 140 4e-28
>seq1903
Length=20131
Score = 239 bits (264), Expect = 5e-58
Identities = 1173/1850 (63%), Gaps = 44/1850 (2%)
Strand=Plus/Plus
Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617
|||| | |||| |||||||| || ||||| | || ||||||||||| || |||
Sbjct 3796 TCAACGGTGAATTGAATGGGAGCAGCTGCGGCCTGAGTGCGCAGGTAGTACATGCCGGTC 3855
Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677
||||| || |||||||| || | ||||| || | |||| | ||| ||
Sbjct 3856 TTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGGTCC 3915
Query 113678 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATA 113737
| |||| || ||||| ||||| || || ||||| |||||||| ||||||||
Sbjct 3916 TTCATGTGGATGTTCAGGGACTGGGACTGGTCAATGAAAGCACCACGATCAGCCGCCATC 3975
Query 113738 TCAATCACATCCTTCATCTTGA----TTTCCCACACAGTTCTGTAGAGGTTCTTAATATC 113793
| | || || || ||| | |||||||| || |||| | | ||| |||||
Sbjct 3976 TGGA-CA-AT--TTGGCGCTGAGAAATCTCCCACACGGTCTTGTACAAGGCCTTGATATC 4031
Query 113794 ATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCAT 113853
|| ||||| | ||| || || |||||||| | | | || | | ||||||
Sbjct 4032 TTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTTCAT 4091
Query 113854 ATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAAC 113910
| | |||||||| || | | || |||| |||| || ||||||||
Sbjct 4092 GGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTT---GAGAAGCCAGGGGTTGACAAC 4148
Query 113911 AACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCA 113970
||||| || || ||| |||| | | ||||| |||| ||||| ||||| |||||
Sbjct 4149 CTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCA 4208
Query 113971 CTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 114030
||| ||||| |||| || |||| ||| ||| ||||||||||| || | ||| | |||
Sbjct 4209 CTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTGGGCATGGGGGCGACGAGCAAGCT 4268
Query 114031 GTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTT 114090
||| || | ||| | ||| | || | |||||||| | |||||| || | |
Sbjct 4269 GTTGCGCACACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAAGTCAGA 4328
Query 114091 TGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAA 114150
| || | | |||||| || || |||||||| || | ||| || || ||||||| ||
Sbjct 4329 AGGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCCCTTGAA 4388
Query 114151 TGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATA 114210
| ||||| || ||||| |||| || | || | ||||| ||||| ||||| ||
Sbjct 4389 CGATTCGTAGGGACCCTCCACCTTGGCAATCTCCATGGAAGCCTCCAGGGCCGCGTGGTA 4448
Query 114211 CATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG 114270
||||||||||| || | |||| | |||||| || ||||| | | ||
Sbjct 4449 GATTGTCTCAAAGATCTGCTTGTTCAGCTCGCGAGCCTCGGGAGACTCAAAGGGCATGCG 4508
Query 114271 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 114330
|| || | || || ||||| |||||||| | ||||| || || || | |||
Sbjct 4509 CAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATAGGTCGGTGGCGCAT 4568
Query 114331 ATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 114390
|| || ||||| || || ||||| | || ||| || | | | || || ||
Sbjct 4569 GTTGCTGTTGCGAGCCTCCTGGACAGGATAGTAGTTGACATCAATGATCTTGTTAAGGTT 4628
Query 114391 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 114450
| || ||||| |||| |||||||||||| | | || | | || | |
Sbjct 4629 GCGGACAACGACCTTGGTGACTTCATGAAGCTTCTTAAAGTCGTAGCAGCCTTCGTTGTA 4688
Query 114451 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 114510
| ||| || ||| ||||| | || |||| || ||||| | |||||| |
Sbjct 4689 GTCGACGTAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCACACGGCAACCTCATCTGGGGC 4748
Query 114511 AGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 114570
| |||||| || || || || || | || || || ||||| |||| |||||||||
Sbjct 4749 ACAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTTTG 4808
Query 114571 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 114630
|| ||| ||| || ||||||||| |||||| | || | || ||||| || ||
Sbjct 4809 GTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTG 4868
Query 114631 GGACTTGAGAATAGCCTTCCAGACATCGGCGGCTG-GCACAG-TGGCGTTG---GCTCGC 114685
|| | || || | | ||| | || ||| || | | ||| ||| | ||
Sbjct 4869 GGCTTCCAGGATGGAATACCA-----CAGCTTCTGAGCGCGGATGGTCTTGCGACCACGT 4923
Query 114686 CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 114745
||||||| ||||||||| || | ||| || ||||| || || | || | ||
Sbjct 4924 CCCTCCTTCTCGTACTTCTCATACAAGGCCTCGAACTCCTCGCCATAGCAGTCAGCAAGG 4983
Query 114746 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA--CCCTCCTCAACACGCTTCA 114803
|| || | | ||||| | ||| | ||| | ||| || ||||||||||||||
Sbjct 4984 CCAGGACATTCGTTGGGGCACATGAGCGTCCA--GTCCAAGTTCTTCTCAACACGCTTCA 5041
Query 114804 TGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 114863
|||||||||| || ||||||||||| ||| | || ||| ||| | ||||| | |
Sbjct 5042 TGAAGAGGTCGGGAATCCAGAGAGCAAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGC 5101
Query 114864 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 114923
| || || || | || | || || | || || |||||||| || || ||||| |
Sbjct 5102 CGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGA 5161
Query 114924 CCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCAT 114977
|| | | || | |||| |||| |||| | ||||| || || ||| |
Sbjct 5162 TGGCAAAAGCACC---AGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGT 5218
Query 114978 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG 115037
| || || |||||||| ||||| ||||| | || || || || || ||| ||
Sbjct 5219 TGAACACTCGAAGCATGGGAATAATACCGTTGGAGGTACCGTTGGTGCCAGCAATGTAAG 5278
Query 115038 ACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 115097
| |||| | || |||| || || || ||||| || ||| || || ||
Sbjct 5279 AGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCACCAGCCATTTTGGAAATCA 5338
Query 115098 GCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAA 115157
|| || | | || || | ||||| || ||||| || |||| | ||| |
Sbjct 5339 TGGCACATGTCTTCAGGGTGTCATAGATACCCTCGATACTATCGTCCTTCATGTCGACCA 5398
Query 115158 GGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGA-GGGTTGGTGTCGC 115215
|||||| |||| || ||||| || ||||| |||||||| | |||| || | ||
Sbjct 5399 AGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCGGCGTTGAACAGGGGTGGGGGAGGC 5457
Query 115216 GTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCT 115273
||| ||| | | |||| ||||| | ||| ||||||| ||| ||||||
Sbjct 5458 ATGGGTGA--AGAACTTGCTAGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCG 5515
Query 115274 TCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATA 115333
|| || || || | || |||||||||| ||||| || || || | | |
Sbjct 5516 TCTCCCCAGATGCCAACAGACACCCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTG 5575
Query 115334 CCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383
||||| ||| || | ||||| | ||||| ||||||| ||||| ||
Sbjct 5576 CCATCAAGCTTCAGAAGGTATGACCGCTCCAGAGTCTTGAAGCCAAAGTA 5625
>seq535
Length=62126
Score = 140 bits (154), Expect = 4e-28
Identities = 351/525 (67%), Gaps = 15/525 (3%)
Strand=Plus/Plus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||| |||||||| ||||| |||||||| || || || ||| ||| ||
Sbjct 15093 GGCAAAGTCAGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 15152
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||||||||| |||||||| | |||||| || | ||| | ||| |||||||||
Sbjct 15153 AGGCATGAGACCTCGCTTCTTGACCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 15212
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222
||||| || || || |||| || |||| |||||||| || || ||||
Sbjct 15213 GCCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGA---AGAGTTCTTGTCCTG 15269
Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282
|| |||||| || ||||| | |||||||| || || || | ||||| || || |
Sbjct 15270 AATCCACTTGATGGCCCAGTCGGCCTTTTTGCGAATGCAAGGAATGGTCTCAATGGCGTT 15329
Query 126283 AAAGA-GTTCCTTC-TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 126340
|||| || || | | ||| | || |||||||| | || ||||| || ||
Sbjct 15330 GAAGAGGTAGCTGCGCTGGCTGTT--CTCCTTGATGTAGGTGTCGATGAGCAGGGAGTAG 15387
Query 126341 GTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 126399
|| ||| ||||| | | ||| || | ||| | ||||||| | || || |||
Sbjct 15388 GTCTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGG 15446
Query 126400 TATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459
||||| ||||| || || | | ||||| ||||| ||||| || |
Sbjct 15447 GATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGC 15506
Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 126516
||||| || |||||||| | ||||| | || || | ||||||| || | ||
Sbjct 15507 GGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTT 15566
Query 126517 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
|||||||| |||||||| || ||||| | ||| || || |||||
Sbjct 15567 CCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 15611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597336015403400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |