Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08] 2,355 sequences; 38,137,656 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq225 89.7 4e-12 >seq225 Length=68716 Score = 89.7 bits (98), Expect = 4e-12 Identities = 102/136 (75%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 366988 AAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTT 367047 ||| ||||||| ||||| || || ||||| ||||| || |||| ||||| || ||| || Sbjct 34044 AAAGTTGTAGTGGCCACCATTGCTTTTGGCATGGGCATCGATAAGCCGGACGTGAGATTT 34103 Query 367048 GTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCA 367107 ||||||||| |||| || |||| | |||||||| || || |||| ||| | || Sbjct 34104 GTTATTCATCATGGCATCCCGAAGAGCTTAGAAGGTTACTACCAGGAAACTGGACGTGCG 34163 Query 367108 GGTCGTGATGGAGAAA 367123 || || ||||| |||| Sbjct 34164 GGCCGAGATGG-GAAA 34178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780705537142630