Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1903 250 3e-61
seq535 140 4e-28
seq1702 98.7 1e-15
>seq1903
Length=20131
Score = 250 bits (276), Expect = 3e-61
Identities = 936/1443 (65%), Gaps = 50/1443 (3%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|||||| ||||| | |||||||| | | || ||| || || || ||||| |||
Sbjct 5559 CCACAGCACATGATTATGCGGGTGTCTGTTGGCATCTGGGGAGACGACATTGAGCGTGTC 5500
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCC-TCTT 111730
||||||||||| || ||||| | | |||| ||| || | || |||| | ||
Sbjct 5499 CTGGAGACATACAACCTCATGTCTAGCAAGTTCTTCACCCATGCCTCCCCCACCCCTGTT 5440
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
|||||| ||||| || |||| ||||| || ||| | | | | ||||| ||
Sbjct 5439 CAACGCCGGTACCCCGCAGGCCCAGCTGTCCTCATGCTTCTTGGTCGACATGAAGGACGA 5380
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
| ||| | || || || | ||| || | ||||||| || || || ||||||
Sbjct 5379 TAGTATCGAGGGTATCTATGACACCCTGAAGACATGTGCCATGATTTCCAAAATGGCTGG 5320
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910
||||||||| || || |||| || | |||| | ||| ||| || || ||
Sbjct 5319 TGGTATCGGCTTGAACGTCCACCGCATCCGTGCCACCGGCTCTTACATTGCTGGCACCAA 5260
Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970
||| || | ||||||||||| |||||||| || || ||| ||| || | |||||
Sbjct 5259 CGGTACCTCCAACGGTATTATTCCCATGCTTCGAGTGTTCAACAACACTGCCAGATATGT 5200
Query 111971 AAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024
| || | ||| | |||| || || | || |||| || ||||| |||||
Sbjct 5199 CGATCAGGGTGG---TAACAAGCGTCCTGGTGCTTTTGCCATCTACCTCGAGCCCTGGCA 5143
Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGG 112082
||| || || | ||||||||||| | || ||||| || | || |||| ||||
Sbjct 5142 CGCCGACGTCTTTGAGTTCCTTGATCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGCGC 5083
Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142
| ||||| | ||| |||||||||||||| || |||||||||||| | |||||| ||
Sbjct 5082 T--CGCGACTTGTTCCTTGCTCTCTGGATTCCCGACCTCTTCATGAAGCGTGTTGAGAAG 5025
Query 112143 A--GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCGTG 112199
| ||| | ||| | ||| | || || || | || || || | || ||| |
Sbjct 5024 AACTTGG--ACTGGACGCTCATGTGCCCCAACGAATGTCCTGGCCTTGCTGACTGCTAT- 4968
Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GA 112257
|| |||||||| || ||| | || ||||||||| | || | || | | | || ||
Sbjct 4967 GGCGAGGAGTTCGAGGCCTTGTATGAGAAGTACGAGAAGGAGGGACGTG-GTC-GCAAGA 4910
Query 112258 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316
| | | ||| | || | ||||| | | || || | | || |||||||||||||
Sbjct 4909 CCATCCGCGCT-CAGAAGCTGTGGTATTCCATCCTGGAAGCCCAGACCGAGACTGGTAAC 4851
Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376
|| | ||||| ||||| || ||| |||| ||||| || |||||||| ||||
Sbjct 4850 CCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTGGGAACC 4791
Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436
||| || ||||||||||| || || ||| | || | | | ||||||| ||
Sbjct 4790 ATCCGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACTGTGCCCCAGATGAGGTTGCC 4731
Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--AT 112494
||||| ||| | || || | || ||||| || || || | | | || ||| | |
Sbjct 4730 GTGTGCAACTTGGCCTCTTTGGCCCTCCCTGCTTACGTCGA-CTACA-ACGAAGGCTGCT 4673
Query 112495 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTA 112554
|| | | | || || || ||||| || || || ||||| |||| | |
Sbjct 4672 ACGACTTTAAGAAGCTTCATGAAGTCACCAAGGTCGTTGTCCGCAACCTTAACAAGATCA 4613
Query 112555 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 112614
||||| || | || || || || ||||| || || ||| | ||||| || |
Sbjct 4612 TTGATGTCAACTACTATCCTGTCCAGGAGGCTCGCAACAGCAACATGCGCCACCGACCTA 4553
Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGAT 112673
||||| | |||||||| ||||| || || | ||| || | || ||| | |||||
Sbjct 4552 TTGGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCTTGCCCTG-CGCATGCCCTTTGAG 4494
Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT 112733
|| ||| || || | || || || ||||||||||| || ||||| || ||
Sbjct 4493 TCTCCCGAGGCTCGCGAGCTGAACAAGCAGATCTTTGAGACAATCTACCACGCGGCCCTG 4434
Query 112734 GAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790
||||| ||| |||| | || |||| || ||||| || ||| | || |||| ||
Sbjct 4433 GAGGC---TTCCATGGAGATTGCCAAGGTGGAGGGTCCCTACGAATCGTTCAAGGGATCA 4377
Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG-CTTC--AC 112847
|| || || | || | || ||||| || |||||||| | |||| |||| ||
Sbjct 4376 CCTGCATCCGAGGGCATCCTCCAATTCGACATGTGGGATG------TCAAGCCTTCTGAC 4323
Query 112848 ---TACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 112904
| || |||||| | |||||||| | ||||||||| | ||| | || ||||| |
Sbjct 4322 TTGTGGGAGTGGGACTCGCTCAAGGAGCAGATCAAGGAGCACGGTGTGCGCAACAGCTTG 4263
Query 112905 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 112964
| | || || ||||| || ||| ||| | || || |||| || || || |||||
Sbjct 4262 CTCGTCGCCCCCATGCCCACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTTC 4203
Query 112965 GAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTC 113024
|| |||||||| | |||||||| | | || | ||| || || ||||| | |||||
Sbjct 4202 GAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCCGGCGAGTTCCAGGTTGTC 4143
Query 113025 AAC 113027
|||
Sbjct 4142 AAC 4140
>seq535
Length=62126
Score = 140 bits (154), Expect = 4e-28
Identities = 352/523 (67%), Gaps = 13/523 (2%)
Strand=Plus/Minus
Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873
||||| || |||||| | ||||| || |||||| || |||| ||||| | | | ||
Sbjct 15611 TGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTGAAC 15552
Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933
|| | || ||| | ||||| |||||||||| |||||||| | || ||||| |||
Sbjct 15551 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATT 15492
Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992
|| ||||| | | ||| | ||||| || |||| | || || |||
Sbjct 15491 GTCAACGAGAACCTGGTCGAGCGCTTCAGCGGCGAGGTCCAGATCCCC-GAGGCTCGATG 15433
Query 101993 TTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 102051
||||| | | || | |||| ||| | | | || ||||| ||| ||||
Sbjct 15432 CTTCTACGGCT-TCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCA 15374
Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAA-GAAGC-AGCTCTTTGAAGCCATCCAAAC 102109
| |||| || || ||||| | | | | | ||| | ||||| | ||||| | ||
Sbjct 15373 TCGACACCTACATCAAGGA--GAACAGCCAGCGCAGCTACCTCTTCAACGCCATTGAGAC 15316
Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168
|||| || |||| || || || || ||||| || |||||| || | |||| | |
Sbjct 15315 CATTCCTTGCATTCGCAAAAAGGCCGACTGGGCCATCAAGTGGATTCAGGACAAGAACTC 15256
Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228
||||||||| |||| || | || ||||| || ||||| ||||||||| |||
Sbjct 15255 -TTCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTG 15197
Query 102229 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288
|||| | | || | ||| |||||||||||||||||||||| ||||| ||| ||||
Sbjct 15196 CCTTTGCCTCCATCTTCTGGGTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCA 15137
Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||||| ||||||||||| ||||| || ||| || |||||
Sbjct 15136 ACGAGCTCATCTCTCGTGATGAGGGTCTGCACACTGACTTTGC 15094
>seq1702
Length=100212
Score = 98.7 bits (108), Expect = 1e-15
Identities = 183/262 (70%), Gaps = 9/262 (3%)
Strand=Plus/Plus
Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123
||| || || || |||||||||| |||||| ||| ||| | ||| | | | || |
Sbjct 77827 GGCGTCGATTTCGTCAATGAAGATGATGCAAGGTGCATTCTTTCGACCCTCAGCGAACAA 77886
Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182
|| | ||||| | ||||| |||||||||||||||||||| | | || ||
Sbjct 77887 GTCTCTCACACGAGAAGGACCCACGCCAACAAACATCTCCACAAACTCGGATCCGCTCAC 77946
Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242
|| | ||| || || || || || ||| | || ||||||||||||||| || |
Sbjct 77947 GCTGAA-GAAAGGCACGCCGGACTCTCCAGCAGTAGCCTTGGCGAGAAGAGTCTTTCCTG 78005
Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 16299
| ||||| || ||||| | ||||||||| ||||||||||| || |||| |||| |
Sbjct 78006 TTCCTGGTGGGCCGGCGAGAATGGCACCTCGAGGAATCTTGGCACCCAGCTTCTCAAACT 78065
Query 16300 ATCTCTCAGGTTGCTT-AAGAA 16320
|||| |||||||| |||||
Sbjct 78066 ---TCTCGGGTTGCTTCAAGAA 78084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620724126895600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |