Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1903 239 5e-58
seq535 98.7 1e-15
seq1424 87.8 2e-12
seq2023 82.4 9e-11
>seq1903
Length=20131
Score = 239 bits (264), Expect = 5e-58
Identities = 1028/1602 (64%), Gaps = 56/1602 (3%)
Strand=Plus/Plus
Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559
||||| ||||| ||||| || ||||| |||||||||||||||||| | || ||
Sbjct 3927 GTTCAGGGACTGGGACTGGTCAATGAAAGCACCACGATCAGCCGCCATCTGGA-----CA 3981
Query 109560 CTTTTG-GCT----AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATG 109614
||| | ||| ||| ||||| || ||||||||||| ||||||||| ||||| |||
Sbjct 3982 ATTTGGCGCTGAGAAATCTCCCACACGGTCTTGTACAAGGCCTTGATATCTTCGGGGATG 4041
Query 109615 TCCACGATGTTTTGAATAGAGCCACCAGCCTTCA-CCATGA---GATCCTTCATCTCTTT 109670
| |||||| ||||| ||||| | ||| | |||| | | |||||| | |
Sbjct 4042 TTGGGGATGTTCTGAATGGAGCC----GTTCTCAGCAATGATACGGTTCTTCATGGCATC 4097
Query 109671 CGACCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTC 109730
|||||||| ||| | || || | | ||| |||||| || || ||
Sbjct 4098 GGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTC 4157
Query 109731 ACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTT 109790
|| ||||| ||||| |||||||||| | |||||||| ||||| ||||| |||||
Sbjct 4158 GCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTT 4217
Query 109791 GCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAG 109850
||| || || || | || || ||||||||||| || | ||| | ||||| || |
Sbjct 4218 GCCCAGAATCTGGGAGGTACTGGCAGTGGGCATGGGGGCGACGAGCAAGCTGTTGCGCAC 4277
Query 109851 ACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGT 109910
||| | | ||| | | |||| | | |||||| || | || | | | ||
Sbjct 4278 ACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTC----CCACAAGTCA--GAAGG 4331
Query 109911 CTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACT 109970
|| |||||||||| || ||| || | ||||| | ||||| || ||||||||
Sbjct 4332 CTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCCCTTGAACGA 4391
Query 109971 CTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACAT 110030
||||| | ||||| |||| ||| | ||| |||||||| || ||||| || || ||
Sbjct 4392 TTCGTAGGGACCCTCCACCTTGGCAATCTCCATGGAAGCCTCCAGGGCCGCGTGGTAGAT 4451
Query 110031 AGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACA 110090
|||||||| || || |||| ||||| ||| | | || ||||| | | ||
Sbjct 4452 TGTCTCAAAGATCTGCTTGTTCAGCTCGCGAGCCTCGGGAGACTCAAAGGGCA-TGCGCA 4510
Query 110091 AAG-AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGT 110149
| || || | || || |||||||| ||||| | |||||| || || || |||||
Sbjct 4511 GGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATAGGTCGGTGGCGCATGT 4570
Query 110150 TAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCT 110209
| | ||||| | || || || ||||| || |||| | || || ||
Sbjct 4571 TGCTGTTGCGAGCCTCCTGGACAGGATAGTAGTTGACATCAATGATCTTGTTAAGGTTGC 4630
Query 110210 TCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAA--CGTTTTCGTCTCCTT 110267
|| ||| |||| |||||| || || | | ||| | | |||| | |
Sbjct 4631 GGACAACGACCTTGGTGACTTCATGAAGCTTCTTAAAGTCGTAGCAGCCTTCG--TTGTA 4688
Query 110268 ATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTC 110327
| ||| || ||||| || | ||| || | |||||||| | | ||| ||| | |
Sbjct 4689 GTCGACGTAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCACACGGCAACCTCATCTGGGGC 4748
Query 110328 GGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTG 110387
||| || | || || || || | |||||| || ||| |||| |||||| ||
Sbjct 4749 ACAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTTTG 4808
Query 110388 ATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTG 110447
|| ||| |||||| |||||| ||||||||| | ||| ||||||| || |||||
Sbjct 4809 GTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTG 4868
Query 110448 TGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACC 110504
| | || |||| | ||| | | || | ||| ||| | ||||| | | | ||
Sbjct 4869 GGCTTCCAGGATGGAATACCACAGCTTCTG-AGCGCGGATGGTCTTGCG--ACCACGTCC 4925
Query 110505 TTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACC 110564
|||| ||||||||| |||||| |||| || |||| || || |||| ||| ||
Sbjct 4926 CTCCTTCTCGTACTTCTCATACAAGGCCTCGAACTCCTCGCCATAGCAGTCAGCAAGGCC 4985
Query 110565 CTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCA--CCCTCCTCAACCCTCTTCATG 110622
| || ||| || | ||| | ||| |||| || |||||| | |||||||
Sbjct 4986 AGGACATTCGTTGGGGCACATGAGCGTCCA--GTCCAAGTTCTTCTCAACACGCTTCATG 5043
Query 110623 AACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCT 110682
|| ||||| |||||||| | || ||| | ||| || || ||||||| | ||
Sbjct 5044 AAGAGGTCGGGAATCCAGAGAGCAAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGCCG 5103
Query 110683 TGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACA 110742
||||| ||| || || | || || | || || | |||||| || ||||| ||||
Sbjct 5104 TGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATG 5163
Query 110743 GCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTG 110796
|| | | || | |||| ||| |||| | ||||| | || ||| |||
Sbjct 5164 GCAAAAGCACC---AGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGTTG 5220
Query 110797 AAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGAC 110856
|| || | ||||| |||||||| || | ||| ||| || || || ||| ||
Sbjct 5221 AACACTCGAAGCATGGGAATAATACCGTTGGAGGTACCGTTGGTGCCAGCAATGTAAGAG 5280
Query 110857 TTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGT 110916
||||||| ||| ||||| | || || |||||||| ||| || |||
Sbjct 5281 CCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCACCAGCCATTTTGGAAATCATG 5340
Query 110917 GCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAG 110975
||||| ||| | || || |||| ||||| || || ||| |||| || | | |
Sbjct 5341 GCACATGTCT-TCAGGGTGTCATAGATACCCTCGATACTATCGTCCTTCATGTCGACCAA 5399
Query 110976 AAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGA-GTGTAGGTGTCGCAT 111034
||||| || |||| ||| | | || || || || ||||| | | || || | ||||
Sbjct 5400 GAAGCATGAGGACAGCTGGGCCTGCGGGGTACCGGCGTTGAACAGGGGTGGGGGAGGCAT 5459
Query 111035 GAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAG 111074
| ||| ||| |||| ||||| ||||||||| || ||
Sbjct 5460 GGGTGA--AGAACTTGCTAGACATGAGGTTGTATGTCTCCAG 5499
>seq535
Length=62126
Score = 98.7 bits (108), Expect = 1e-15
Identities = 367/559 (66%), Gaps = 16/559 (3%)
Strand=Plus/Plus
Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554
|||||| || || || || ||||| |||||||||||||| || ||| || ||
Sbjct 15093 GGCAAAGTCAGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 15152
Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614
||||||||| |||| ||||| | ||| ||||||| ||| || ||||||||
Sbjct 15153 AGGCATGAGACCTCGCTTCTTGACCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 15212
Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC--GAA 119671
|||||| || ||| || || | || |||| || ||||| ||| |||||| |||
Sbjct 15213 GCCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGC-AAAGGAAGAGTTCTTGTCCTGAA 15271
Query 119672 -CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGA 119730
|||||||| ||||||| |||||| ||||| || | || | ||||| | ||
Sbjct 15272 TCCACTTGATGGCCCAGTCGGCCTTTTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGA 15331
Query 119731 A-AAGTTGCTTC-TTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788
| | || ||| | | | | | ||||| || || | || ||||| ||||||||
Sbjct 15332 AGAGGTAGCTGCGCTGGCTGTTC--TCCTTGATGTAGGTGTCGATGAGCAGGGAGTAGGT 15389
Query 119789 CTCACCATGAACCAT-TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAA 119847
||| || | | | ||| || ||| || | || || | ||||| |||| |
Sbjct 15390 CTCGGAGTGGATGTTCTCCATCATG-ATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGA 15448
Query 119848 TTTGCACTTCGTCAGCAAAATTG-TTGTTGATATTTTCAAAAACAATTCCATCGGATCCA 119906
| || || ||| | || || | | | | || || ||||| ||||| || |
Sbjct 15449 TCTGGACCTCG-CCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCG 15507
Query 119907 GCGAAGAATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAG--TGTT-TTC 119963
|| ||||| || | ||||| ||||| | || || | |||||| || ||| |||
Sbjct 15508 GCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTC 15567
Query 119964 CAGTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCC 120023
||||||| || ||| || |||| || | |||||| || |||||| || || |||
Sbjct 15568 CAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAGGAGGCCTCGGCC 15627
Query 120024 TTTTTATAGAGTTCCCAAA 120042
||||| || | || |||||
Sbjct 15628 TTTTTGTACATTTGCCAAA 15646
>seq1424
Length=45752
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796
|| || || || |||||||| || || ||||| || || || ||| |||| | | ||
Sbjct 13090 AATAGCTCTCGAACACGCTTGGCCCCGACACCAACAAAGATTTCATCGAATTCACTGCCA 13031
Query 11797 GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856
|| | | ||| |||||| | ||| ||||||| ||||||||||| || |||||
Sbjct 13030 GACATGTAGAAGAATGGAACACCGGCCTCTCCAGCGACAGCTCGAGCGAGCAGCGTCTTT 12971
Query 11857 CCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAG 11916
|| |||||||| | ||| |||| || | || ||| | ||| ||||| || ||
Sbjct 12970 CCAGTACCAGGGGGCCCAACGAGGAGAACACCTTTGGGTAGCTTAGCACCCAAATCAGAG 12911
Query 11917 TAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969
||| || || || ||||| || || | ||||| || || ||||||||
Sbjct 12910 AAGCTATCCGGGTTACGAAGGAATTCGACCACCTCCTGTAGCTCTTCCTTGGC 12858
>seq2023
Length=152745
Score = 82.4 bits (90), Expect = 9e-11
Identities = 159/230 (69%), Gaps = 10/230 (4%)
Strand=Plus/Plus
Query 167536 GCATCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATG 167595
||||| |||||| || || | |||||| | ||| | ||||| |||| |||||||
Sbjct 20118 GCATCAGAGCCACCGGCAAGTCGAGAACCAAAGTTACCGCTGGGCTCCAGAACATTGATG 20177
Query 167596 TTATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTTT-CAGCGAGGGAAACTTC 167654
||||| || ||| | |||| | ||||| | ||| |||| | || || || ||||
Sbjct 20178 TTATTGGATCCCACAAAATCCTGGGCCAGTCCAATGATGGTTTGCTGC-AGAGAGGCTTC 20236
Query 167655 GCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTC 167714
|||||||||||| ||| || | ||| ||||| | |||| || |||||| | ||
Sbjct 20237 GCCGTGGTGGTAGGCAGTCAGTCCAGAGACATAACCAGCCAGCTCCACAACCT---TTTC 20293
Query 167715 ATCTTTGA----GATTCTTTTGGAAACATGAATACATAACCTTGCGTTGA 167760
|| |||| | |||| || |||||||| || | ||||| || |||
Sbjct 20294 GTCCTTGACCACGTTTCTCTT-GAAACATGCGTAGAGCACCTTTCGCTGA 20342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588958662019000
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